Detailed information on CNT30686251


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 1e-95

BLAST vs NONCODE:
NONMTRT002043, E-value = 5e-62

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30253560Triticum urartuAvena sativa21.8164.7193.75464forward
CNT30460114Triticum urartuSaccharum spontaneum22.0531.2991.04469forward
CNT30115854Triticum urartuOryza nivara2262.0791.24468forward

Expression of CNT30686251

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MVDNKQTAAAYFNQMHQKNLKTIYLKDST*

>peptide 2 (30 aa)
MIQHSCRTCLSYRERSLAFSGEINLQSYAY*

>peptide 3 (30 aa)
MLIIQRKKPSFLRGNQSTILRLLGRSRYRI*

>peptide 4 (39 aa)
MHTRLYTAKGVDLNYKQIYVVENKQTAATYFSHYLNDPT*

>peptide 5 (53 aa)
MRRCWSGGMPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICICREEYQTEW*

>peptide 6 (30 aa)
MSTRDTSGSASGETELPPTRLIQNSTKTKS*

>peptide 7 (30 aa)
MLIIQGKKTSFLRGNQSTILRLLGRSRYRI*

>peptide 8 (72 aa)
MRERIGQQISFPQHQIGAETDQIPQYYTSIQPYNQRRSRRHGERGGKLGTLRRWGRRIRRAWSRSETRLGGDL

>peptide 9 (53 aa)
MPSLSWILALTLSIVSELSTSRVMVLPVRVFTKICIPPRRRSTRWRVDSFWML*

>peptide 10 (53 aa)
MCQQRFQPTDSSLNQRSRTDTGIRQFSNQHSRTHTNEKTVLLNDRAPPTGRPG*

Sequence

>CNT30686251
GCAAATAAGAGCAATATCTGAAGTTCACTTATTCATTACTTATAACGATACTGATGTGCCAGCAACGGTTTCAACCAACAGATAGTTCACTAAACCAACG
CAGTAGGACTGACACGGGGATTCGACAGTTTTCAAACCAACACAGTAGGACTCACACGAACGAGAAAACAGTTCTACTGAACGACAGGGCACCGCCCACC
GGACGACCAGGATAAACCAGCAGGTCAAACGACAGGGCAATTACTGACCACCGCGAAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTA
GTCGGCGAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA
TTGTCGATTGTGTCAGAGCTCTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCATACCACCACGGAGGCGGAGCACCAGGT
GGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCC
CTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGC
ATCTGCAGAGAAGAATACCAAACAGAATGGTAAGCCTCAAGAAGCAAACTGATATGATGAAGACTACTACATAAATAAGATTCCATACATCACATCATAG
TGAATATAAACAAACGGCAGTAGCCATATACTTCCTCCGTCCGGAAATACTTGTCATCAAAATAGATAAAAGGGGATGTATCTAGACGTATTTTAGTATT
TAGGTGCATGCTCATAACCATAAAAAAACTAAAGATTGTTATTCCATGGAGCTGTCAGACATGCTTATATCATCCAAGGGAAGAAGCCTAGGTTTTTTCC
GAGAAAAGTCAATCTACAGATGGTAGATAATAAACAAACGGCAGCAGCATATTTTAATCAGATGCACCAGAAGAATCTAAAGACCATTTATCTCAAGGAT
TCCACATAGCTGCCGGACATGCTTATCATCCAAGGAAAAAAGACTAGCTTTCTTAGGGGAAATCAATCTACAATCCTACGCCTATTAGGAAGGTCACGGT
ACAGAATATGAGCACGCGCGACACATCAGGCAGTGCTTCTGGAGAGACAGAATTACCACCCACAAGGCTAATACAGAATTCGACCAAAACAAAGAGCTAA
ACGAATCTATCGCGAAGGAGCGGACGAACCAGTACACAAATCATGCATACGAGACTATATACGGCTAAAGGAGTTGACCTCAACTACAAACAGATCTATG
TGGTAGAGAATAAACAAACGGCAGCAACATATTTTTCTCACTATCTCAATGATCCAACATAGAGAAGTCTGTTAGCTTTTTCCGAGAAGCTAACAGACTG
TCGCGCAGATGCACCAAAAGAAAAATCTAAAGACCATTTATCTCAATGATCCAACATAGCTGCCGGACATGCTTATCATACAGAGAAAGAAGCCTAGCTT
TCTCAGGGGAAATCAATCTACAATCCTACGCCTATTAGGAAGGTCTCGGTACAGAATATGAGCACGAGCAACACATCAAGCAGTATAGGAGCGCCTGGAG
AGAGAATTACGACAAAAAGCTAATATTGAATTCGACCATAATAAAGAGTTAAAGACGTATCTATCACATAGGAGCGGACGAACCAGTACATAAATCATGC
GTATGAGACTATACGGCTTAAAGAGTTGACCTCGAACACGAACAGATCTACCCCTTCAATCTACACGCAAAAATCCCTAAGAATTCGCCGAAGCTTCATC
GACCTAACATGCGCGAACGGATCGGACAACAAATTTCGTTCCCACAGCATCAGATCGGAGCAGAAACCGACCAAATTCCACAATACTACACCTCCATCCA
ACCATATAATCAACGCCGATCTAGACGACACGGGGAGAGGGGAGGCAAGCTCGGTACCTTGAGGCGGTGGGGGAGGAGGATTCGACGAGCGTGGAGTCGA
TCGGAGACGAGATTGGGTGGGGATTTG