Detailed information on CNT30686102


BLAST search results

BLAST vs Swiss-Prot:
sp|Q02500|NU6M_WHEAT, E-value = 2e-71

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596149Triticum urartuOryza meridionalis23.9946.1396.89161forward
CNT30104748Triticum urartuOryza rufipogon20.579.8496.38138forward

Expression of CNT30686102

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MYRIFSTYNHQTRDQSRARQNRKYHGTSSSLEMELECWSKKTHSSRSITTSAVVRISFSSSKPTLFL*

>peptide 2 (49 aa)
LFIIFLLESKAFRRNTSCLFTFVVLCIVSTIAPIIATNKIRLETKNQTE*

>peptide 3 (42 aa)
MVSLSKMKNISHQKISPIIPLTVNQKCRKRLGWETKRNVPDF*

>peptide 4 (80 aa)
MGNKTECTGFLARTTIKPETKAGLDKTESIMVRRPPLKWNLNAGARRRIQVDLLQPARLFVFHFLLPSRRSSYKRKHSLN*

>peptide 5 (37 aa)
MLEQEDAFKSIYYNQRGCSYFIFFFQADALLIKESTH*

>peptide 6 (36 aa)
VHYIPPRIQGISSEYILSFHLCSPMHSKYYSPNHSY*

Sequence

>CNT30686102
CTGTTCATTATATTCCTCCTAGAATCCAAGGCATTTCGTCGGAATACATCCTGTCTTTTCACCTTTGTAGTCCTATGCATAGTAAGTACTATAGCCCCAA
TCATAGCTACTAATAAAATCAGACTAGAAACCAAAAACCAGACGGAATAGTAGGTATAAAGCAAATTGCCCAATGTTTCCAAATTAGTCCAACTTCGTAC
CTTTCCGGCATAAACCGTATATCTCAGAGAGGTCGTATTTCTGTGGGTTGGTAGTAATGGAATGGTTTCATTATCTAAAATGAAGAACATTTCCCACCAA
AAGATCAGTCCAATAATACCACTCACTGTAAACCAGAAGTGTCGCAAAAGACTAGGATGGGAAACAAAACGGAATGTACCGGATTTTTAGCACGTACAAC
CATCAAACCAGAGACCAAAGCAGGGCTCGACAAAACAGAAAGTATCATGGTACGTCGTCCTCCCTTGAAATGGAACTTGAATGCTGGAGCAAGAAGACGC
ATTCAAGTCGATCTATTACAACCAGCGCGGTTGTTCGTATTTCATTTTCTTCTTCCAAGCCGACGCTCTTCTTATAAAAGAAAGCACTCACTGAATTAAT
TACTGAATCTCGTCTTTCTCTTAGCGCCGAGAATTTTTTACGTGTCCGGGTCGATCAGAGGTTCGGCTTGC