Detailed information on CNT30686069


BLAST search results

BLAST vs Swiss-Prot:
sp|Q4LB22|METK3_HORVU, E-value = 7e-90

BLAST vs NONCODE:
NONPOPT000587, E-value = 2e-34

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522677Triticum urartuSetaria italica36.3134.8490.61309forward
CNT30549537Triticum urartuIpomoea triloba39.135081.08333forward
CNT30266729Triticum urartuChenopodium quinoa37.2524.5984.86317forward
CNT30194995Triticum urartuPisum sativum24.0921.5384.88205forward
CNT30303722Triticum urartuTriticum aestivum32.5545.71100277forward
CNT30225924Triticum urartuHordeum vulgare5177.0996.77434forward
CNT3086110Triticum urartuVigna radiata21.516.3783.61183forward
CNT30508528Triticum urartuSolanum lycopersicum15.0424.6685.16128forward
CNT30441436Triticum urartuAegilops tauschii29.8550.199.61254forward
CNT3014998Triticum urartuZea mays30.6747.1185.82261forward
CNT30608385Triticum urartuGossypium raimondii44.0768.1881.6375forward
CNT30218287Triticum urartuKalanchoe fedtschenkoi33.0254.1483.27281forward
CNT30212612Triticum urartuHelianthus annuus11.9942.3286.27102forward
CNT30477100Triticum urartuArabidopsis halleri17.6337.9786.67150forward
CNT30363315Triticum urartuSorghum bicolor36.3137.2389.32309forward
CNT30358838Triticum urartuLactuca sativa24.9130.9980.66212forward
CNT3055182Triticum urartuAmborella trichopoda24.3219.5886.47207forward
CNT30101941Triticum urartuOryza rufipogon39.3740.1285.67335forward
CNT30574675Triticum urartuOryza barthii20.5638.888175forward
CNT30496713Triticum urartuDigitaria exilis38.6621.8586.63329forward
CNT30116702Triticum urartuOryza nivara24.3220.1685.02207forward
CNT30551132Triticum urartuOryza brachyantha10.4623.0688.7689forward

Expression of CNT30686069

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MSGDCCSMLTSTLQRSASRPTSSEMKPMLRQVSRTIFS*

>peptide 2 (30 aa)
SRLMLIIPGLKSKFSFTSLRISLSGILPVP*

>peptide 3 (47 aa)
MTKRPDGFRWKMVFSSRYFAGITGLMTCSLRSAAISSLGSRRWHSRT*

>peptide 4 (46 aa)
VQVDADHPGPEVKVLLHELEDLPVGDLAGAVGVDEHRQRLRHTDGV*

>peptide 5 (48 aa)
MTMLVLVTVSQASKTASETWSQSLSGWPSFTDSDVKRNVSAAIPLVLAV

Sequence

>CNT30686069
AGTCCAGGTTGATGCTGATCATCCCGGGCCTGAAGTCAAAGTTCTCCTTCACGAGCTTGAGGATCTCCCTGTCGGGGATCTTGCCGGTGCCGTAGGAGTC
GACGAACACAGACAAAGGCTCAGGCACACCGATGGCGTATGAGATCTGCACAATGCAGCGGCGTGCGAGGCCGCTGGCGATGATGCTCTTGGCGGCCTGC
CTGGCAATGTAGGCGCCACTGCGGTCGACCTTGGTTGGGTCCTTGCCAGAGAAGGCACCGCCGCCGTGGGCTCCCCAGCCACCATAGGTGTCGATGATGA
TCTTGCGGCCGGTGAGACCGGCGTCACCGTGAGGGCCGCCGATGACGAAGCGGCCAGACGGGTTCAGGTGGAAGATGGTGTTCTCATCGAGGTACTTCGC
GGGGATCACCGGCTTGATGACATGCTCCTTGAGGTCCGCGGCAATCTCGTCGTTGGGGTCTCGTCGGTGGCATAGCCGAACATGATGCCCTGGTCACCGG
CGCCGACCTCTTCGGGACGCTTGGTGAAGTGTCCGTGAACACCCTGGGCAATGTCAGGGGACTGCTGCTCGATGTTGACGAGCACCTTGCAACGGTCGGC
GTCGAGACCAACATCATCAGAGATGAAGCCGATGTTGCGGCAGGTGTCGCGCACGATCTTCTCATAGTCGACGGTGGCCTTAGTGGTGATCTCGCCCAAG
ACCATGACCATGTTGGTCTTGGTGACAGTCTCGCAGGCATCCAAGACGGCGTCGGAGACCTGGTCACAGAGCTTGTCGGGATGGCCCTCATTCACAGACT
CGGACGTGAAGAGGAACGTCTCGGCCGCCATTCCTTTAGTGCTAGCGGTGC