Detailed information on CNT30685932


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30185311Triticum urartuSecale cereale54.8913.5785.86191forward

Expression of CNT30685932

Peptides detected in this lncRNA

>peptide 1 (61 aa)
CKTNFDVASRPKTESSCSIQNSKYHPRQRRIHVWIHKLQSTHFNFICWITENDSNLLVAAQ*

>peptide 2 (56 aa)
AKQTLMWLADRKQSHLVPSRTANIIRGKDEYTFGFISSKAPTLISFAGLQKMIVTY*

>peptide 3 (48 aa)
MIHIIAGMVSYCWSMMRTYSTKFRTVHPSSHAWLHVKAVGHLHAARLVT

Sequence

>CNT30685932
GTGCAAAACAAACTTTGATGTGGCTAGCAGACCGAAAACAGAGTCATCTTGTTCCATCCAGAACAGCAAATATCATCCGAGGCAAAGACGAATACACGTT
TGGATTCATAAGCTCCAAAGCACCCACTTTAATTTCATTTGCTGGATTACAGAAAATGATAGTAACTTATTAGTAGCAGCACAGTAGGTAATCGACCACA
TGATCCACATTATAGCTGGCATGGTCTCTTATTGCTGGTCCATGATGCGTACGTATAGCACAAAGTTTAGAACGGTCCATCCATCATCACATGCTTGGCT
TCACGTTAAGGCGGTTGGCCACCTTCATGCCGCACGACTTGTCACACT