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Detailed information on CNT30685867


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 4e-52

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30440266Triticum urartuAegilops tauschii95.5279.8195.48597forward

Expression of CNT30685867

Peptides detected in this lncRNA

>peptide 1 (29 aa)
NIYQSGLLNLRTGRSRDRRRHTCSSIHQP*

>peptide 2 (33 aa)
HLSVRTTQSQNGKKQRSTTTHMQQHPSAMKLSA*

>peptide 3 (56 aa)
TSISPDYSISEREEAEIDDDTHAAASISHEVVGLELELTALTCRGRSWWRRPRRCC*

>peptide 4 (40 aa)
MACTKKPNMENMARRPFLISFTLSSAKVSGSADSPAVSQP*

>peptide 5 (44 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCVLAGFCFG*

Sequence

>CNT30685867
AACATCTATCAGTCCGGACTACTCAATCTCAGAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGCAGCATCCATCAGCCATGAAGTTGTCGGC
CTAGAGCTTGAGCTGACTGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACGGGGGGGCCCTTGCCGGTGACGATGGC
CTGCACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCCGCGAAGGTCTCGGGGTCGGCGGACAGCCCC
GCGGTGTCCCAGCCGTAGTCACCGGGGAACTCGCCGGTGAGGTAGCTCGGGGGGTCGCCGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGAGCCGTACC
ACGGGCTGCTGGACGCCGCCACCTTGGGCTTGCCCGCCGTCTTGCGCATGGTGATGCGGCCCTCGCCGAAGGGCGCCGCCCTGGAGGCCTTCACCGGGGT
GCCGGCCATCGCCGGGGAGGAGAGCGCCATGGTCGCGGCCGCCATCGCGCGCTGCGTGCTAGCTGGCTTTTGCTTCGGGTGAGCTGAGGCTGGCAGTGGG
AGGCGCTGGTGGTCGTTGGTGCTGT