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Detailed information on CNT30685781


BLAST search results

BLAST vs Swiss-Prot:
sp|P09755|CB22_SOYBN, E-value = 1e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696173Triticum urartuOryza sativa46.4449.7591.11405forward
CNT30187536Triticum urartuSecale cereale62.0462.1896.3541forward
CNT30301046Triticum urartuTriticum aestivum59.9863.2496.56523forward
CNT30554920Triticum urartuOryza glaberrima46.4454.9591.11405forward
CNT30251938Triticum urartuAvena sativa52.6458.0393.9459forward
CNT30664908Triticum urartuTriticum dicoccoides96.22100.7295.83839forward
CNT30473044Triticum urartuSaccharum spontaneum46.3345.8690.59404forward
CNT30129613Triticum urartuCorymbia citriodora37.7344.9590.27329forward
CNT30369202Triticum urartuOryza glumipatula30.6229.9794.38267forward
CNT30108138Triticum urartuOryza longistaminata39.6842.7293.35346forward
CNT30103236Triticum urartuOryza rufipogon46.4441.0391.11405forward
CNT30574663Triticum urartuOryza barthii45.34891.65395forward

Expression of CNT30685781

Peptides detected in this lncRNA

>peptide 1 (32 aa)
FRVSERQVVKQKNRDALIDLKNNQIHYTNTIL*

>peptide 2 (74 aa)
MACTKKPNMENMARRPFLISFTLSSAKASGSSASSSGKTQPSAPSMAQRQWMTSSSRFLAKVSGSADSPAVSQP*

>peptide 3 (44 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCVLAGFCFG*

>peptide 4 (35 aa)
MQHLSVRTTQSQNGKKQRSTTTHMQQHPSAMKLSA*

Sequence

>CNT30685781
CATTCAGAGTTTCAGAGAGACAAGTAGTTAAGCAGAAGAACAGAGATGCCTTGATTGATCTGAAAAATAACCAGATACATTACACAAACACCATCTTGTA
GTGTACACACACCAACTCCTCATCTCGACTCGCCCTCACATGCAACATCTATCAGTCCGGACTACTCAATCTCAGAACGGGAAGAAGCAGAGATCGACGA
CGACACACATGCAGCAGCATCCATCAGCCATGAAGTTGTCGGCCTAGAGCTTGAGCTGACTGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCC
AGGCGTTGTTGGGGCCCTTGCCGGTGACGATGGCCTGCACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGATCTCCTTCACCTTGAG
CTCCGCGAAGGCCTCGGGGTCCTCGGCGAGCAGCTCGGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAGCGGCAGTGGATGACCTCCAGCTCCCGG
TTCTTGGCGAAGGTCTCGGGGTCGGCGGACAGCCCCGCGGTGTCCCAGCCGTAGTCACCGGGGAACTCGCCGGTGAGGTAGCTCGGGGGGTCGCCGGAGA
GCGGGCCGAGGTAGAGCACGCGGTCGGAGCCGTACCACGGGCTGCTGGACGCCGCCACCTTGGGCTTGCCCGCCGTCTTGCGCATGGTGATGCGGCCCTC
GCCGAAGGGCGCCGCCCTGGAGGCCTTCACCGGGGTGCCGGCCATCGCCGGGGAGGAGAGCGCCATGGTCGCGGCCGCCATCGCGCGCTGCGTGCTAGCT
GGCTTTTGCTTCGGGTGAGCTGAGGCTGGCAGTGGGAGGCGCTGGTGGTCGTTGGTGCTAGGCCTCGGCCCG