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Detailed information on CNT30685754


BLAST search results

BLAST vs Swiss-Prot:
sp|Q03033|EF1A_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONBNAT007048, E-value = 5e-108

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727591Triticum urartuCorchorus capsularis51.9631.9383.76862forward
CNT30588666Triticum urartuMusa acuminata28.2796.583.58469forward
CNT30440878Triticum urartuAegilops tauschii21.9446.3197.53364forward
CNT3011290Triticum urartuZea mays51.7862.4787.43859forward
CNT30721807Triticum urartuTriticum spelta21.439.4999.44355forward
CNT30100761Triticum urartuOryza rufipogon34.9101.0589.81579forward

Expression of CNT30685754

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MAALVTLAPVGSFFSTPLMTPTATVCLMSRTAKRPRGG*

>peptide 2 (53 aa)
MGLVGIIFTIPASPFFRNLGAASISLPDRLSILVTSSANLTAMWEVWQSSTGA*

Sequence

>CNT30685754
CAGGCAGACAAAACCACAAATGGGATAAGAGCACAATAATGGAATCGAAATAGAGTATTTAAACGACACATCATAGCTCGCACACAGGTGCAGGAGTCGA
AGTGCAACAACGCCCAGAAACACCACTTAACATACACTAAGATTCTCCAAAAAAGACTTGACACTAAAACTTCTGCTAGATAACTCGATGGCAGACACCA
GAGCACTCATTTCTTCTTGATGGCAGCCTTGGTAACCTTGGCGCCGGTGGGGTCCTTCTTCTCAACGCCCTTGATGACACCAACAGCAACCGTTTGTCTC
ATGTCACGCACAGCGAAGCGGCCAAGAGGAGGGTAGGTGGCGAAGGTCTCCACAACCATGGGCTTGGTGGGAATCATCTTCACAATACCAGCGTCACCGT
TCTTCAGGAACTTGGGCGCAGCCTCAATCTCCTTACCAGATCGCCTGTCAATCTTGGTCACCAGCTCAGCAAACTTGACAGCAATGTGGGAGGTGTGGCA
GTCCAGCACTGGGGCGTAGCCGTTGCCGATCTGACCAGGGTGGTTCATGATGATGACCTGAGAGTTGGATGCAACAAACCCACGCTTCAGATCCTTGACA
GCAACGTTCTTCACGTTGAAGCCGACATTGTCACCAGGAAGCGCCTCCAGGAGGGACTCGTGGTGCATCTCAACAGACTTGACCTCAGTTGTCAGACCAG
TGGGGCCAAAGGTAACAACCATACCAGGCTTGATGACACCAGTCTCAACACGTCCAACAGGCACAGTTCCAATGCCACCAATCTTGTAAACATCCTGAAG
GGGAAGACGCAGGGGCTTGTCTGAGGGCCTCTTGGGCTCATTGATCTGGTCAAGAGCCTCAAGAAGGGTAGGGCCCTTGTACCAGTCAAGGTTGGTGGAC
CTCTCAATCATGTTGTCACCCTCAAACCCAGAGATGGGAACAAAGGGAACCTTCTCAGGGTTGTAGCCGACCTTCTTCAGGTACGATGAGACTTCCTTGA
CGATTTCCTCATAACGGGCCTTCGAGTACTTGGGAGTGGTGGCATCCATCTGTGACAGATCATAAGAGCAATCACATCAGATTAAAACAGATATGGTGAA
CTAGTAAATCACTAGCATGTAACAATAACAAGAGAAGTGTGTTTAGCAGCATATCTATCATACAATGCAAGTTCCACAGAACAAGTATAATAGGCAAACA
AACTATTTAGTTTTTAAATTACAACCTCCATAACTAAGTAGAAGACAATTTTACAGTTCAATCAGAGGTAGCAATATATAACAAAGTCGGTACCAAATGA
AGATCCCACTTAGTGAAGTAATGCTAAGAAATCTCCTCTAGTGACCTACTCATACTCAGTGAAGAAATGCTATGAAACAACCAGGATTGACACTGGCAAT
TCAGTGCTACTTGTGAACATGTGCATTTTACTGATTCTGAAGTATATAGCAAAATAGTGGTAGTACTGTGAATTAAGATGTAACTAACCAAATGAGCAAC
ATATGTTATAATCACAAACCTAAATAAATGGCAGCCAGTTCACATGGAGTTTCTGTACTACTTAACATGGACAGTCATCAAGTAATTCTCAATCAAAGTG
GATAGCAAAACAGTAAACACATCATACGGCTACACATAAGAACAAGCATTGAAAGGTTA