Detailed information on CNT30685626


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30538027Triticum urartuBrassica napus53.7772.5782.991376forward
CNT30229013Triticum urartuAnanas comosus44.7472.6187.61145forward
CNT3067522Triticum urartuLeersia perrieri35.7674.0386.56915forward

Expression of CNT30685626

Peptides detected in this lncRNA

>peptide 1 (62 aa)
KKQAHVQGSFIHSSSSKSAAAQHKVQTQPDITLDHSTVATKNKTRRGHADNHNGVHRKTTDS*

>peptide 2 (62 aa)
MARHLLATTEAEHQVKGGLLLDVVVRQSAAILKLLTSKDEALLVWWDTLLVLDLRLHIVDGV*

>peptide 3 (61 aa)
MRRCWSGGIPSLSWIFAFTLSMVSEDSTSSVIVLPVRVFTKICIPPLRRSTRWRVDSFWML*

>peptide 4 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSDDSTSSVMVLPVRVLTKICMPPLRRSTRWRVDSFWML*

>peptide 5 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSKVMVLPVRVLTKICMPPLRRSTRWRVDSFWML*

>peptide 6 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSKVMVLPVRVLTKICMPPLRRSTRWRVDSFWML*

>peptide 7 (40 aa)
MVSEDSTSSVMVLPVRVLTKICMPPRRRSTRWRVDSFWML*

>peptide 8 (39 aa)
MFKFDHKLKRSVNIYDFQTRTDAQVQIPSSFDTTRYNIS*

>peptide 9 (30 aa)
KNRHTFRAHLFIQVHPNLLQHSIKFRHSQI*

>peptide 10 (31 aa)
MIFRQELMHKYRYLQVLTQQDTISVKSTVLL*

>peptide 11 (68 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVLPVRVFTKICICKHKVYQNHNKALVIMKLQNIKHI*

>peptide 12 (87 aa)
MQLRYIRSQIKHRCNIKRLMSATKSERLSRNLAESINHTRLDEHNQHQHQLRLKSADLPDNPGITVRDFTTTEPNQQQSINKPIVSN*

Sequence

>CNT30685626
AAAAAAACAGGCACACGTTCAGGGCTCATTTATTCATTCAAGTTCATCCAAATCTGCTGCAGCACAGCATAAAGTTCAGACACAGCCAGATATAACGCTA
GACCACAGCACGGTAGCAACAAAGAACAAGACCAGACGAGGACACGCTGACAATCACAACGGAGTACACAGAAAGACAACCGACTCGTGAGCCCAGAGAC
ATAAGCAGCTCCATGGCCAGGCACTTACTGGCCACCACGGAGGCGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGG
CCATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCTG
AAGACTCGACCTCGAGCGTGATTGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATACCACCCCTGAGACGGAGCACCAGGTGGAGGGTGGACTCCTT
CTGGATGTTGTAGTCCGCCAGAGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGGATC
TTCGCCTTCACATTGTCAATGGTGTCTGAAGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCACCACGCAGGC
GGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTC
TGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATGGTGTCGGATGACTCGACCTCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTG
ACGAAGATCTGCATGCCACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCT
TGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCTGAAGACTCGACCTCCAA
GGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA
GCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGT
CGATGGTGTCTGAAGACTCGACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCACCCCTGAGGCGGAGCACCAGGTGGAG
GGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCC
TTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCT
GCAAACATAAAGTGTACCAAAACCATAATAAGGCACTCGTAATCATGAAACTGCAGAACATAAAGCATATATGAACCAGAAGGCCATGATCCAAGAGAGA
CGAAATTGTAACTATGTCTTGAACTATTAGATAGCAGATTGATGTTCAAGTTTGACCACAAGCTAAAAAGATCAGTTAATATATATGATTTTCAGACAAG
AACTGATGCACAAGTACAGATACCTTCAAGTTTTGACACAACAAGATACAATATCAGTTAAATCAACAGTACTACTGTAAGCAAACACAATTGACTCTTA
AGAGCAGAACCGGTGCACAAGAACGGATCCTCCAAACAACTACTAGGCCCAACAACTAACATAGGAACCAGTTTTGCTAAAGCACATCTAGGTGTGCCCA
AGTATGCAACTCAGGTATATCCGTTCACAGATCAAGCATAGGTGCAACATAAAAAGGCTCATGAGCGCCACAAAGTCTGAGCGACTCAGCAGGAACCTAG
CGGAATCAATCAACCACACACGCCTAGATGAACATAATCAACATCAACATCAGTTGCGTCTCAAATCGGCAGATCTACCCGATAATCCAGGCATAACCGT
GAGGGATTTCACGACAACGGAGCCAAATCAACAGCAATCGATCAACAAACCTATCGTCTCGAACTAGTACTGCTAACACGGAACGAGCGGATCAACTAGA
ACACCTCTAATCGGCAGATCTACCGGATAATCCAAATCGAGAGGGATTTCGCGACAACCGACTACGGGGCAGATCAACAGCAACATAATCAACGATAATA
GCGAGGGGCGCGGTCTGAAATTCACGTACCTTGGAGGTGGGCGAGAAGGCCTTGGCTTCGATTCGATCGGAAACTTTCTTGGGGTCGCTTGGCAGGGAGG
ATTGGATGAGTGGAGGAGGAGACGGGAGGGGAGGGGGATTTAAAGGGGGAAGAGTCCCG