CANTATAdb - search

Detailed information on CNT30685567

BLAST search results

BLAST vs Swiss-Prot:
sp|P80264|NDUS2_SOLTU, E-value = 3e-20

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30596463	Triticum urartu	Oryza meridionalis	62.6	101.23	97.32	410	forward

Expression of CNT30685567

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MQSVSALDYSIPDRRIMAPRKHSIQQQHLLQPREDKTDVSYIRAFTAERRSR

>peptide 2 (33 aa)
HAVVVAIFNMSLSHICLAAGQHLRKKGREDFIQ*

>peptide 3 (30 aa)
MSSRMLRSGIRSEILDLPVPSRHGKEIRKK*

Sequence

>CNT30685567
CATGCTGTAGTCGTCGCCATATTCAATATGTCACTTAGTCATATCTGCCTCGCAGCAGGTCAGCACCTTCGAAAGAAAGGGAGGGAGGACTTCATTCAGT
GACTCCGCGATCGCCCTCTAAACGATCAAAATAAGGTAAAGCTTGAAGATAAGTTTTGTACTCGATTAATTTCTCAGTCCCTCTAGTCGGTGATCCAATA
TGTGGTTCCGCACGTTCCACCACTTCTCCGTTCATTTCCAATACTGATCGTGAAACACCATGAGCAGCAGGATGTTGAGGTCCGGAATTCGAAGTGAAAT
TCTTGATTTGCCCGTTCCTAGTCGTCATGGGAAAGAAATAAGAAAGAAATAAGAAAGAGATTATTCCCCTAGAGCTTGTCCAGTACCACCAGTACTCAAA
ATGCATCTCCGCGCGTCTACCTGGCGCTTTTATTAGCCGCCTTGCATGCAAGCGAAGCGCTATTGGCGGCAATTAATAGCTCATTGAGCGATGATTGATG
CAGTCAGTCAGTGCCCTCGATTATTCTATTCCTGATAGAAGGATCATGGCGCCCCGGAAGCATTCCATCCAGCAGCAGCATCTCCTTCAACCACGCGAGG
ACAAAACTGATGTTAGCTACATTCGAGCGTTCACCGCAGAGAGGCGATCTCGAAC