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Detailed information on CNT30685463

BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 3e-98

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30696223	Triticum urartu	Oryza sativa	52.58	52.35	90.81	468	forward
CNT30186748	Triticum urartu	Secale cereale	71.12	75.09	96.52	633	forward
CNT30298565	Triticum urartu	Triticum aestivum	97.53	100.35	97.24	868	forward
CNT30393211	Triticum urartu	Triticum turgidum	65.28	100.35	98.62	581	forward
CNT30554896	Triticum urartu	Oryza glaberrima	52.58	49.01	90.81	468	forward
CNT30252168	Triticum urartu	Avena sativa	58.43	62.95	95.38	520	forward
CNT30664228	Triticum urartu	Triticum dicoccoides	93.37	100.36	98.92	831	forward
CNT30362790	Triticum urartu	Sorghum bicolor	52.25	51.72	92.69	465	forward
CNT30596822	Triticum urartu	Oryza meridionalis	47.3	49.53	92.4	421	forward
CNT30369182	Triticum urartu	Oryza glumipatula	45.62	48.33	90.39	406	forward
CNT30108137	Triticum urartu	Oryza longistaminata	45.96	51.84	92.18	409	forward
CNT30103478	Triticum urartu	Oryza rufipogon	52.58	48.15	90.81	468	forward
CNT30117552	Triticum urartu	Oryza nivara	52.58	49.11	90.6	468	forward

Expression of CNT30685463

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCVLAGFCFG*

>peptide 2 (31 aa)
RVSERQVVKQKNRDALIDLKNNQIHYTNTIL*

>peptide 3 (35 aa)
MQHLSVRTTQSQNGKKQRSTTTHMQQHPSAMKLSA*

>peptide 4 (29 aa)
MAQRQWMTSSSRFLAKVSGSADSPAVSQP*

Sequence

>CNT30685463
TCAGAGTTTCAGAGAGACAAGTAGTTAAGCAGAAGAACAGAGATGCCTTGATTGATCTGAAAAATAACCAGATACATTACACAAACACCATCTTGTAGTG
TACACACACCAACTCCTCATCTCGACTCGCCCTCACATGCAACATCTATCAGTCCGGACTACTCAATCTCAGAACGGGAAGAAGCAGAGATCGACGACGA
CACACATGCAGCAGCATCCATCAGCCATGAAGTTGTCGGCCTAGAGCTTGAGCTGACTGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGG
CGTTGTTGTTGACGGGGTCGGCGAGGATGCTCTGCGCGTGCACCAGGCTGGGGTTGCCGAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGAGCCGGC
CTTGAACCAGACGGCCTCGCCGAACTTGACGCCGTTGCGGGCGAGCAGCTCGGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAGCGGCAGTGGATG
ACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTCGGGGTCGGCGGACAGCCCCGCGGTGTCCCAGCCGTAGTCACCGGGGAACTCGCCGGTGAGGTAGCTCG
GGGGGTCGCCGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGAGCCGTACCACGGGCTGCTGGACGCCGCCACCTTGGGCTTGCCCGCCGTCTTGCGCAT
GGTGATGCGGCCCTCGCCGAAGGGCGCCGCCCTGGAGGCCTTCACCGGGGTGCCGGCCATCGCCGGGGAGGAGAGCGCCATGGTCGCGGCCGCCATCGCG
CGCTGCGTGCTAGCTGGCTTTTGCTTCGGGTGAGCTGAGGCTGGCAGTGGGAGGCGCTGGTGGTCGTTGGTGCTGTGGAGTGAAGCGGGA