Detailed information on CNT30685426


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674319Triticum urartuSetaria viridis35.1882.2591.46820forward
CNT30110940Triticum urartuOryza longistaminata48.7341.8987.941136forward

Expression of CNT30685426

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MFKFDHKLKRSVNIYDFQTRTDAQVQIPSSFDTTRYNIS*

>peptide 2 (40 aa)
MVSEDSTSSVMVLPVRVLTKICIPPLRRSTRWRVDSFWML*

>peptide 3 (30 aa)
KNRHTFRAHLFIQVHPNLLQHSIKFRHSQI*

>peptide 4 (31 aa)
MIFRQELMHKYRYLQVLTQQDTISVKSTVLL*

>peptide 5 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSDDSTSSVMVLPVRVLTKICMPPLRRSTRWRVDSFWML*

>peptide 6 (62 aa)
MARHLLATTEAEHQVEGGLLLDVVVRQSAAILKLLTSKDQTLLVRWDTLLVLDLRLHIVNGV*

>peptide 7 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSKVMVLPVRVLTKICMPPLRRSTRWRVDSFWML*

>peptide 8 (61 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSKVMVLPVRVLTKICMPPLRRSTRWRVDSFWML*

>peptide 9 (68 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVLPVRVFTKICICKHKVYQNHNKALVIMKLQNIKHI*

>peptide 10 (62 aa)
KKQAHVQGSFIHSSSSKSAAAQHKVQTQPDITLDHSTVATKNKTRRGHADNHNGVHRKTTDS*

>peptide 11 (87 aa)
MQLRYIRSQIKHRCNIKRLMSATKSERLSRNLAESINHTRLDEHNQHQHQLRLKSADLPDNPGITVRDFTTTEPNQQQSINKPIVSN*

Sequence

>CNT30685426
AAAAAAACAGGCACACGTTCAGGGCTCATTTATTCATTCAAGTTCATCCAAATCTGCTGCAGCACAGCATAAAGTTCAGACACAGCCAGATATAACGCTA
GACCACAGCACGGTAGCAACAAAGAACAAGACCAGACGAGGACACGCTGACAATCACAACGGAGTACACAGAAAGACAACCGACTCGTGAGCCCAGAGAC
ATAAGCAGCTCCATGGCCAGGCACTTACTGGCCACCACGGAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGG
CCATCCTCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCTG
AAGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATACCACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTT
CTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATC
TTCGCCTTCACGTTGTCAATGGTGTCGGATGACTCGACCTCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCACCCCTGAGGC
GGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTC
CGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCTGAAGACTCGACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTG
ACGAAGATCTGCATGCCACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCT
TGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCTGAAGACTCGACCTCCAA
GGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA
GCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGT
CGATCGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGCAAACATAAAGTGTACCAAAACCATAA
TAAGGCACTCGTAATCATGAAACTGCAGAACATAAAGCATATATGAACCAGAAGGCCATGATCCAAGAGAGACGAAATTGTAACTATGTCTTGAACTATT
AGATAGCAGATTGATGTTCAAGTTTGACCACAAGCTAAAAAGATCAGTTAATATATATGATTTTCAGACAAGAACTGATGCACAAGTACAGATACCTTCA
AGTTTTGACACAACAAGATACAATATCAGTTAAATCAACAGTACTACTGTAAGCAAACACAATTGACTCTTAAGAGCAGAACCGGTGCACAAGAACGGAT
CCTCCAAACAACTACTAGGCCCAACAACTAACATAGGAACCAGTTTTGCTAAAGCACATCTAGGTGTGCCCAAGTATGCAACTCAGGTATATCCGTTCAC
AGATCAAGCATAGGTGCAACATAAAAAGGCTCATGAGCGCCACAAAGTCTGAGCGACTCAGCAGGAACCTAGCGGAATCAATCAACCACACACGCCTAGA
TGAACATAATCAACATCAACATCAGTTGCGTCTCAAATCGGCAGATCTACCCGATAATCCAGGCATAACCGTGAGGGATTTCACGACAACGGAGCCAAAT
CAACAGCAATCGATCAACAAACCTATCGTCTCGAACTAGTACTGCTAACACGGAACGAGCGGATCAACTAGAACACCTCTAATCGGCAGATCTACCGGAT
AATCCAAATCGAGAGGGATTTCGCGACAACCGACTACGGGGCAGATCAACAGCAACATAATCAACGATAATAGCGAGGGGCGCGGTCTGAAATTCACGTA
CCTTGGAGGTGGGCGAGAAGGCCTTGGCTTCGATTCGATCGGAAACTTTCTTGGGGTCGCTTGGCAGGGAGGATTGGATGAGTGGAGGAGGAGACGGGAG
GGGAGGGGGATTTAAAGGGGGAAGAGTCCCG