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Detailed information on CNT30685372


BLAST search results

BLAST vs Swiss-Prot:
sp|P12463|PSBA_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONMTRT000175, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30196112Triticum urartuPisum sativum45.4790.0690.17417forward
CNT30391503Triticum urartuTriticum turgidum38.3970.499.43352forward
CNT30605440Triticum urartuGossypium raimondii36.5381.9191.64335forward
CNT30655381Triticum urartuRosa chinensis60.09102.9990.38551forward
CNT30627896Triticum urartuDaucus carota96.460.2688.24884forward
CNT30360144Triticum urartuLactuca sativa60.74102.5889.77557forward
CNT3058320Triticum urartuAmborella trichopoda45.1559.5789.86414forward
CNT30102095Triticum urartuOryza rufipogon15.0558.9796.38138forward

Expression of CNT30685372

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MSSHNIISFFLLTKFVTLISGFIFSSFPDQTRGYQGTMHTIRKASLTNRVNQENSSSSCNRS*

Sequence

>CNT30685372
CTTCAAAAATTCTTATATGTTAGCAGAAAACCTTATCCATTAATAGATGGAACTTCAACAGCAGCTAAGTCTAGAGGGAAGTTGTGAGCATTACGTTCGT
GCATTACTTCCATACCAAGGTTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAGATTGGTTGAAATTGAAACC
ATTTAGGTTGAAAGCCATAGTACTAATACCTAAAGCAGTGAACCAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTG
AAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATAAGTTTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCGG
ATTCATTTTCAGTAGTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATACCATCAGAAAAGCTTCCTTGACCAATAGGGTAAATCAAGAAAAC
AGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGCT
ACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATC
CGATCGCCGCAGAAGTAGGGATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCACGAATACCATCAATATCTACTGG
AGGGGCAGCGATGAAGGCGATAATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGATTTTCAGTG
CTAGTTATCCAGTTGCA