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Detailed information on CNT30685331


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40004|RBS_HORVU, E-value = 3e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30186769Triticum urartuSecale cereale76.3367.8197.09516forward
CNT30393514Triticum urartuTriticum turgidum82.2578.4299.1556forward
CNT30664831Triticum urartuTriticum dicoccoides82.9989.3399.64561forward

Expression of CNT30685331

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MCMCIYIATDCIHIRACFLEPCWYMNMDIHIFLGTNKKDKWRRKTQSNVRVDKTAMALYMWPVVSELFRPCRTPRSPVA*

>peptide 2 (54 aa)
MKLTHCTWRMLSNPMMRTYASGYSFLTSSTSLITCVASVHPNIGSFHIVQYRPS*

Sequence

>CNT30685331
AATAAAAGATGCGCGTGCCGTGCCAAAGATGTTTCTCATTATTAATTACCCGAATACATAGTCGACAGATTGTATAAATATATTATGTGCATGTGCATAT
ACATAGCCACCGATTGCATTCACATACGAGCATGCTTTCTCGAGCCATGTTGGTACATGAACATGGACATACACATATTCTTAGGAACAAACAAGAAAGA
TAAATGGAGAAGGAAAACCCAAAGCAATGTCAGAGTTGACAAAACCGCAATGGCACTTTATATGTGGCCCGTGGTGAGTGAGCTGTTTAGGCCTTGCCGG
ACTCCTCGCAGCCCGGTGGCTTGAAGGCGATGAAGCTGACGCACTGCACCTGGCGCATGTTGTCGAATCCGATGATGCGGACATACGCGTCAGGGTACTC
CTTCTTGACCTCCTCCACCTCGTTGATCACCTGTGTGGCGTCGGTGCACCCGAACATAGGCAGCTTCCACATTGTCCAGTACCGGCCATCGTAGTACCCA
GGGGATGCGTTGTGCTCACGGAAGATGAACCCAACCTTGCTGAACTCGAGGCAAGGCACCCATTTGGAGCGGATCAGGTAATCGACCTGCTTGAGGAGGG
CCTCCGTGCTGAGCGGTGGCAGGTAGGACAGGGTATATAGCTTGCTAGGAGGAGGCACTCTGGCTTGAGGACTGCT