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Detailed information on CNT30685221


BLAST search results

BLAST vs Swiss-Prot:
sp|Q05968|PR1_HORVU, E-value = 6e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690438Triticum urartuOryza sativa13.5433.4392.44119forward
CNT30300230Triticum urartuTriticum aestivum60.9864.7389.55536forward
CNT30226328Triticum urartuHordeum vulgare25.3750.5793.27223forward
CNT30552029Triticum urartuOryza glaberrima17.7526.7684.62156forward
CNT30444949Triticum urartuSaccharum spontaneum25.4826.0582.59224forward
CNT30141157Triticum urartuLolium perenne26.9624.6686.5237forward
CNT30369249Triticum urartuOryza glumipatula9.4436.5687.9583forward

Expression of CNT30685221

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MAAAMARASKTASLGVSITPWLAVQMVSTMYVPAL*

>peptide 2 (36 aa)
MFQGTVKRLIIFIVHDGEYIAYYGIFTRPAPLASYR*

>peptide 3 (41 aa)
HYKICVIFHFQYMKVTFLFTPKHMLLCLDFSGDIYSYLLVL*

Sequence

>CNT30685221
ACATTATAAAATATGTGTAATATTTCATTTTCAATATATGAAGGTAACCTTTTTATTTACCCCTAAACACATGCTACTCTGCTTGGATTTTTCAGGTGAT
ATATACTCCTATTTACTTGTGTTGTAGTCTTGTAGAGTACCAGTCAATAACTCAATAGGAGTATCAGCTAGAGATTGAACTAACTGTAGTGAAAGGTTCA
TATATGTTTCAAGGTACCGTAAAAAGGCTCATTATTTTTATAGTCCATGATGGAGAATACATAGCTTATTACGGCATTTTTACTCGCCCAGCCCCTCTAG
CTAGTTATAGATAGGAACGTGCATGAATCCTTGCATGGGTGTTGCCATGCAAGGAACGAGGGACTACTGGACTATATATATGGTTAGTATGGTTTCTGTC
CAATGACATTCCCGGCGGGCTCGTAGTTGCAGACGACGCGAGCGCAGCCGATGCTGGTCGACGCGCGCCACACCACCTGCGTGTAGTGCCCGCACACCTT
CCCGCCCGCGCAGGTGTTGGACCCGTAGTCGTAGTCCTTCTTCTCGTCCACCCACAGCTTCACCGCGTCCGCCGCCTTCCAGTCCGCGCCGGCCGACCCC
CAGAAGATGTTCTCCCCGTAGGGCCCGCCCGAGTGCTGGAGCTTGCAGTCGTTGATCCTCTGTTGTGAGGCGAGAGGTAGTCCTGAGGCGAGTTCTGGGC
TTGGGAAAGGTTAACCATGGCGGCCGCCATGGCTAGGGCGAGCAAAACGGCCAGCTTGGGCGTCTCCATTACTCCCTGGCTCGCTGTCCAAATGGTTTCT
ACTATGTATGTGCCTGCACTATAGCTAGCTGCGTATGTGTAGGCCGTGGCTAGCTGGCTTTGCCTTGCTTTTGTACGTA