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Detailed information on CNT30685109


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30147611Triticum urartuBrachypodium distachyon25.1138.8394.42233forward

Expression of CNT30685109

Peptides detected in this lncRNA

>peptide 1 (38 aa)
LAKEAEKQANKLQSNNLHFTTNQSQGHRSLAEAGIEIQ*

>peptide 2 (38 aa)
MAALVTLAPVGSFFSTPLMTPTATVCLMSRTVPMPPIL*

>peptide 3 (29 aa)
MQSSSTTAAGHLLRNSWHSHQACRTILHI*

>peptide 4 (29 aa)
WRKKQKNKLTSCNLITCISQQISLRGTGV*

Sequence

>CNT30685109
TTTGGCGAAAGAAGCAGAAAAACAAGCTAACAAGTTGCAATCTAATAACTTGCATTTCACAACAAATCAGTCTCAGGGGCACAGGAGTTTAGCCGAAGCA
GGAATAGAAATACAGTAATTAAACGACAGACAGATCATTGCTCGCTCGGGATAAGAGTCTGAAGCAACAAAAGCAATGACCGTGAACAAAATCCTTCTGC
AAGATAGCGCGCCTATTTCTTCTTGATGGCAGCCTTGGTAACCTTGGCGCCGGTGGGGTCCTTCTTCTCCACACCCTTGATGACACCAACAGCAACCGTT
TGTCTCATGTCACGCACAGTTCCAATGCCACCAATCTTGTAAACATCCTGAAGGGGAAGACGCAGGGGCTTGTCTGAGGGCCTCTTGGGCTCATTGATCT
GGTCAAGAGCCTCAAGAAGGGTAGGGCCCTTGTACCAGTCAAGGTTGCCAACCTTCTTCAGGTACGATGAGACTTCCTTGACAATTTCCTCGTAACGGGC
CTTTGAGTACTTGGGAGTGGTGGCGTCCATCTGTAACAGATAACCAGAGCAATCCCATCAGATAAACAAAATTATTGAGAAGTACAAGTATATAAAGATG
CAAACAAATACAAGCAACAGCAAACATGTGTAGCACTCATGTGATGGAAGTTGCAGGAATAAGAGATAATGAGCAAACAAGCAGTTTGTAACTCATAAAT
TAAGATACAATGATTTGGCAACGTGACAAAAGCTAACCAACTACAATGCAATCCAGCAGTACTACTGCAGCTGGGCATTTACTAAGAAACTCTTGGCATT
CACATCAAGCATGTAGAACAATTCTACATATCTAGATTAGATAAAACAAGGCAATCAACATATATATTATAGGATAACCAATCAGTGTTGCACAAAAATC
AGAATTAGACAAATGTCAAATCAGTATA