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Detailed information on CNT30685081


BLAST search results

BLAST vs Swiss-Prot:
sp|Q03033|EF1A_WHEAT, E-value = 6e-142

BLAST vs NONCODE:
NONCQUT008675, E-value = 4e-104

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673325Triticum urartuSetaria viridis33.1258.4690.25318forward
CNT3050518Triticum urartuCucumis sativus25.5239.4586.94245forward

Expression of CNT30685081

Peptides detected in this lncRNA

>peptide 1 (33 aa)
EKQANKLQSNNLHFTTNQSQGHRSLAEAGIEIQ*

>peptide 2 (38 aa)
MAALVTLAPVGSFFSTPLMTPTATVCLMSRTAKRPRGG*

Sequence

>CNT30685081
GAAAAACAAGCTAACAAGTTGCAATCTAATAACTTGCATTTCACAACAAATCAGTCTCAGGGGCACAGGAGTTTAGCCGAAGCAGGAATAGAAATACAGT
AATTAAACGACAGACAGATCATTGCTCGCTCGGGATAAGAGTCTGAAGCAACAAAAGCAATGACCGTGAACAAAATCCTTCTGCAAGATAGCGCGCCTAT
TTCTTCTTGATGGCAGCCTTGGTAACCTTGGCGCCGGTGGGGTCCTTCTTCTCCACACCCTTGATGACACCAACAGCAACCGTTTGTCTCATGTCACGCA
CAGCGAAGCGGCCAAGAGGAGGGTAGCGTCACCGTTCTTCAGGAACTTGGGCGCAGCCTCAATCTCCTTACCAGATCGCCTGTCAATCTTGGTCACCAGC
TCAGCAAACTTGACAGCAATGTGGGAGGTGTGGCAGTCCAGCACTGGGGCGTAGCCGTTGCCGATCTGACCAGGGTGGTTCATGATGATGACCTGAGAGT
TGGATGCAACAAACCCACGCTTCAGATCCTTGACAGCAACGTTCTTCACGTTGAAGCCGACATTGTCACCAGGAAGCGCCTCCAGGAGGGACTCGTGGTG
CATCTCAACAGACTTGACCTCAGTTGTAACAACCATACCAGGCTTGATGACACCAGTCTCAACACGTCCAACAGGCACAGTTCCAATGCCACCAATCTTG
TAAACATCCTGAAGGGGAAGACGCAGGGGCTTGTCTGAGGGCCTCTTGGGCTCATTGATCTGGTCAAGAGCCTCAAGAAGGGTAGGGCCCTTGTACCAGT
CAAGGTTGGTGGACCTCTCAATCATGTTGTCACCCTCAAACCCAGAGATGGGAACAAAGGGAACCTTCTCAGGGTTGTAGCCAACCTTCTTCAGGTACGA
TGAGACTTCCTTGACAATTTCCTCGTAACGGGCCTTTGAGTACTTGGGAGTGGTGGCGTC