Detailed information on CNT30685015


BLAST search results

BLAST vs Swiss-Prot:
sp|P08963|CB22_HORVU, E-value = 1e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30188236Triticum urartuSecale cereale59.9762.3996.41418forward
CNT30225034Triticum urartuHordeum vulgare50.9359.0793.8355forward
CNT30393592Triticum urartuTriticum turgidum96.4194.6597.77672forward
CNT30664426Triticum urartuTriticum dicoccoides97.793.1697.65681forward
CNT30603508Triticum urartuOryza punctata47.4942.3889.12331forward

Expression of CNT30685015

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MQHLSVRTTQSQNGKKQRSTTTHMQQHPSAMKLSA*

>peptide 2 (44 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCVLAGFCFG*

>peptide 3 (82 aa)
ITRYITQTPSCSVHTPTPHLDSPSHATSISPDYSISEREEAEIDDDTHAAASISHEVVGLELELTALTCRGRSWWRRPRRCC*

Sequence

>CNT30685015
AAATAACCAGATACATTACACAAACACCATCTTGTAGTGTACACACACCAACTCCTCATCTCGACTCGCCCTCACATGCAACATCTATCAGTCCGGACTA
CTCAATCTCAGAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGCAGCATCCATCAGCCATGAAGTTGTCGGCCTAGAGCTTGAGCTGACTGCG
CTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCGGCGAGGCCCAGGGGGTCGAAGCTGCCGCC
GGGGTAGAGCGGGTCCACGATCTCGCCGAGCGGGCCGCCGGCGACGCGGTAGCCCTCCACGGCGCCCATGAGCACCACCTGGCAGGCCCAGATGGCGAGG
ATGCTCTGCGCGTGCACCAGGCTGGGGTTGCCGAGGTAGAGCACGCGGTCGGAGCCGTACCACGGGCTGCTGGACGCCGCCACCTTGGGCTTGCCCGCCG
TCTTGCGCATGGTGATGCGGCCCTCGCCGAAGGGCGCCGCCCTGGAGGCCTTCACCGGGGTGCCGGCCATCGCCGGGGAGGAGAGCGCCATGGTCGCGGC
CGCCATCGCGCGCTGCGTGCTAGCTGGCTTTTGCTTCGGGTGAGCTGAGGCTGGCAGTGGGAGGCGCTGGTGGTCGTTGGTGCTGTGGAGTGAAGCG