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Detailed information on CNT30684972


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40004|RBS_HORVU, E-value = 2e-94

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30578479Triticum urartuOryza barthii56.6541.383.73375forward

Expression of CNT30684972

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MLFTCMHLILPPLLTLPRLAPLERRLTGSDGGGRRGHHGGGHGCTM*

>peptide 2 (45 aa)
MLSNPMMRTYASGYSFLTSSTSLITCVASVHPNIGSFHIVQYRPS*

Sequence

>CNT30684972
ATATGGCCTGTCGTGAGTGAGCTGTTTAGGCCTTGCCGGACTCCTCGCAGCCCGGTGGCTTGAAGGCGATGAAGCTGACGCACTGCACCTGACGCATGTT
GTCGAATCCGATGATGCGGACATACGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGATCACCTGTGTGGCGTCAGTGCACCCAAACATAGGC
AGCTTCCACATTGTCCAGTACCGGCCATCGTAGTACCCAGGAGATGCGTTGTGCTCACGGAAGATGAACCCAACCTTGCTGAACTCGAGGCAAGGCACCC
ACTTGGAGCGGATCAGGTAGTCGACCTGCTTGAGGAGGGCCTCCGTGCTGAGCGGTGGCAGGTAAGACAGGGTCTCGAACTTCTTGATGCCCTCGATGGG
CCACACCTGCAAATCAGATTGACAGTCATTTCACATATGATTGTTATTGTCTTCCGTGAGGTAGAAAATGAGTAGAAAACAGAGACGATGTTGTTTACCT
GCATGCACCTGATCCTTCCACCGTTGCTGACGCTGCCGAGGCTAGCGCCGTTGGAGCGGCGGCTGACGGGGAGCGACGGAGGTGGCCGACGAGGCCATCA
CGGTGGGGGCCATGGCTGTACTATGTAGGTATATAGCTTGCTAGGAGGAGGCACTCTGGCTT