Detailed information on CNT30684845


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639730Triticum urartuNymphaea colorata18.9933.8486.17311forward
CNT30698284Triticum urartuQuercus lobata8.1846.8591.79134forward
CNT3020462Triticum urartuCitrullus lanatus15.9323.387.36261forward
CNT30160100Triticum urartuPistacia vera17.6430.5289.97289forward
CNT30539604Triticum urartuBrassica napus14.7728.389.26242forward
CNT30439068Triticum urartuAegilops tauschii21.7364.8592.42356forward
CNT30608730Triticum urartuGossypium raimondii18.9951.8387.14311forward
CNT30228831Triticum urartuAnanas comosus13.0668.1589.25214forward
CNT30721809Triticum urartuTriticum spelta47.6251.6998.33780forward

Expression of CNT30684845

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MVIPLSRSAFSLSSTQAYLKDLLFISAASFSNLSITRLSIPPSL*

>peptide 2 (39 aa)
MRLDLLGRFTATKQVHQREGEPRTQLRENPSNNGRNRHA*

>peptide 3 (43 aa)
MAGDLKQFETTDNESRQRKGADRDAHLGGRRRNRAEAAAGMGD*

>peptide 4 (38 aa)
LAKEAEKQANKLQSNNLHFTTNQSQGHRSLAEAGIEIQ*

>peptide 5 (38 aa)
MAALVTLAPVGSFFSTPLMTPTATVCLMSRTAKRPRGG*

>peptide 6 (29 aa)
WRKKQKNKLTSCNLITCISQQISLRGTGV*

Sequence

>CNT30684845
TTTGGCGAAAGAAGCAGAAAAACAAGCTAACAAGTTGCAATCTAATAACTTGCATTTCACAACAAATCAGTCTCAGGGGCACAGGAGTTTAGCCGAAGCA
GGAATAGAAATACAGTAATTAAACGACAGACAGATCATTGCTCGCTCGGGATAAGAGTCTGAAGCAACAAAAGCAATGACCGTGAACAAAATCCTTCTGC
AAGATAGCGCGCCTATTTCTTCTTGATGGCAGCCTTGGTAACCTTGGCGCCGGTGGGGTCCTTCTTCTCCACACCCTTGATGACACCAACAGCAACCGTT
TGTCTCATGTCACGCACAGCGAAGCGGCCAAGAGGAGGGTAGGTGTGGCAGTCCAGCACTGGGGCGTAGCCGTTGCCGATCTGACCAGGGTGGTTCATGA
TGATGACCTGAGAGGTGAAGTTGGCTGCCTCCTTGGCAGGGTCATCCTTGGAGTTGGATGCAACAAACCCACGCTTCAGATCCTTGACAGCAACGTTCTT
CACGTTGAAGCCGACATTGTCACCAGGAAGCGCCTCCAGGAGGGACTCGTGGTGCATCTCAACAGACTTGACCTCAGTTGTCAGACCAGTGGGGCCAAAG
GTAACAACCATACCAGGCTTGATGACACCAGTCTCAACACGTCCAACAGGGCAATATCAATGGTGATACCCCTCTCACGCTCGGCCTTCAGCTTGTCAAG
CACCCAGGCGTACTTGAAAGACCTCTTGTTCATCTCAGCGGCTTCCTTCTCAAACCTCTCGATCACACGCTTGTCAATACCTCCAAGCTTGTAGATCAGA
TGGCCAGTGGTGGTCGACTTGCCAGAGTCGACATGGCCAATGACCACGATGTTGATGTGAGTCTTCTCCTTACCCATGGCTGAAGCTAGCAAACAGAAAC
ATCAAGGTAAGCAGATGTTAGAACAACAGATCCAAGAGATCCAAGTGTTAACAAAGTAATATCTTGTCTATTTGTGAGGAACAGACAAGTAGAAGAAGCG
TTTAACGTGATGGAATTACACTAGAAGCAGTCAGACTGCAGGTACTTATTAGATCTACGAATTACTGCAGTGATAACGCTAACAAAATTCACCATACAAG
TACATGAAGACCATGCAGTAAACTCTCAAAGAGAAGTCTCCTAGAGAGCTCACAGATCCTACAGAACCCTAAGTACTATACGAATCCATCTAACAATACA
TGCAACAAGGCACGGAGATGATTCAGGGACATCTCGCGACACCAAATCGGTAACAGAAACAGTAAAAACCTACAGATCAAGGCTACGGCATGAGGTAGTC
ATCAGAATTGAAGACAAAAAAAGACATGCGGCTAGATCTACTCGGGAGATTCACCGCTACTAAGCAGGTGCACCAGCGCGAAGGCGAACCGAGGACTCAG
CTTCGAGAAAATCCGTCAAACAACGGACGAAATCGACATGCATAACCGCAAAAAGAGCCTAAAACTCGATCTACCCGCACGCCACAGCCACCGCACACAA
ACATGGCCGGAGATCTGAAGCAATTCGAGACCACGGACAACGAATCGAGGCAGAGAAAGGGGGCGGATCGGGATGCTCACCTCGGAGGAAGGAGAAGGAA
CCGAGCGGAGGCGGCGGCGGGGATGGGGGACTGAGAGG