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Detailed information on CNT30684780


BLAST search results

BLAST vs Swiss-Prot:
sp|P07398|RBS3_WHEAT, E-value = 2e-72

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30258024Triticum urartuAvena sativa69.3271.9392.68287forward

Expression of CNT30684780

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MLSNPMMRTYASGYSFLTSSTSLITCVASVHPNIGSFHIVQYRPS*

Sequence

>CNT30684780
ATGGCCTGTCGTGAGTGAGCTGTTTAGGCCTTGCCGGACTCCTCGCAGCCCGGTGGCTTGAAGGCGATGAAGCTGACGCACTGCACCTGACGCATGTTGT
CGAATCCGATGATGCGGACATACGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGATCACCTGTGTGGCGTCAGTGCACCCAAACATAGGCAG
CTTCCACATTGTCCAGTACCGGCCATCGTAGTACCCAGGAGATGCGTTGTGCTCACGGAAGATGAACCCAACCTTGCTGAACTCGAGGCAAGGCACCCAC
TTGGAGCGGATCAGGTATATAGCTTGCTAGGAGGAGGCACTCTGGCTTGAGGACTGCTGCGTTGGGTCAGCAGCGGCTTATATAACCCTTTGGCCCTTCC
TGAGCAACAACAAG