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Detailed information on CNT30684702


BLAST search results

BLAST vs Swiss-Prot:
sp|P18566|RBS2_ORYSJ, E-value = 6e-71

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30115743Triticum urartuOryza nivara31.4223.9785.07268forward

Expression of CNT30684702

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MLFTCMHLILPPLLTLPRLAPLERRLTGRPAVDLSPWKGATEVADEAITVGAMAVLCRYIAC*

>peptide 2 (56 aa)
MDIHIFLGTNKKDKWRRKTQSNVRVDKTAMALYIWPVVSELFRPCRTPRSPLTHCT*

>peptide 3 (45 aa)
MLSNPMMRTYASGYSFLTSSTSLITCVASVHPNIGSFHIVQYRPS*

>peptide 4 (29 aa)
MYTLTDYNSSSAHIRWSSRLNCVLIDVGI*

Sequence

>CNT30684702
CATGGACATACACATATTCTTAGGAACAAATAAGAAAGATAAATGGAGAAGGAAAACCCAAAGCAATGTCAGAGTTGACAAAACTGCAATGGCACTTTAT
ATATGGCCTGTCGTGAGTGAGCTGTTTAGGCCTTGCCGGACTCCTCGCAGCCCGCTGACGCACTGCACCTGACGCATGTTGTCGAATCCGATGATGCGGA
CATACGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGATCACCTGTGTGGCGTCAGTGCACCCAAACATAGGCAGCTTCCACATTGTCCAGTA
CCGGCCATCGTAGTACCCAGGAGATGCGTTGTGCTCACGGAAGATGAACCCAACCTTGCTGAACTCGAGGCAAGGCACCCACTTGGAGCGGATCAGGTAA
GACAGGGTCTCGAACTTCTTGATGCCCTCGATGGGCCACACCTGCAAATCAGATTGACAGTCATGTATACATTAACAGACTATAACTCTAGTTCTGCACA
TATCAGATGGAGTAGCCGGCTAAATTGTGTGCTGATTGACGTCGGGATTTGAAACTATTGTATGTAATTGACCATATGAAAGTTCACATATGATTGTTAT
TGTCTTCCGTGAGGTAGAAAATGAGTAGAAAACAGAGACGATGTTGTTTACCTGCATGCACCTGATCCTTCCACCGTTGCTGACGCTGCCGAGGCTAGCG
CCGTTGGAGCGGCGGCTGACGGGGAGGCCGGCGGTGGACTTGAGCCCCTGGAAAGGAGCGACGGAGGTGGCCGACGAGGCCATCACGGTGGGGGCCATGG
CTGTACTATGTAGGTATATAGCTTGCTAGGAGGAGGCACTCTGGCTTGAGGAC