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Detailed information on CNT30684661


BLAST search results

BLAST vs Swiss-Prot:
sp|P03938|YCF68_MAIZE, E-value = 4e-56

BLAST vs NONCODE:
NONCQUT005543, E-value = 9e-124

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30712184Triticum urartuGlycine max13.7396.8391.91581forward
CNT30177674Triticum urartuSecale cereale23.248.3798.68982forward
CNT30221081Triticum urartuHordeum vulgare19.4540.6498.91823reverse complement
CNT30538116Triticum urartuBrassica napus7.9927.8997.04338forward
CNT30552256Triticum urartuOryza glaberrima6.12100100259reverse complement
CNT30668159Triticum urartuTriticum dicoccoides16.8710096.36714forward
CNT30627901Triticum urartuDaucus carota20.6574.789.13874forward
CNT30721122Triticum urartuTriticum spelta19.1498.5499.38810forward
CNT30362263Triticum urartuSorghum bicolor10.6151.9198.89449forward
CNT30318666Triticum urartuAsparagus officinalis17.3283.3994.82733reverse complement
CNT30148380Triticum urartuBrachypodium distachyon17.3954.2898.78736forward
CNT30575742Triticum urartuOryza barthii10.5499.5596.86446forward
CNT30604668Triticum urartuOryza punctata10.1898.1896.75431forward
CNT30726606Triticum urartuLupinus angustifolius15.1254.2891.25640forward

Expression of CNT30684661

Peptides detected in this lncRNA

>peptide 1 (36 aa)
KLLRAKWSMHERVRCFFYSFPWRSWAILDLNQRPRP*

>peptide 2 (35 aa)
MPRAEVRVPSAAALKYEPRGLAIASPRGSYQALRR*

>peptide 3 (38 aa)
MHHLCPRSRGHPSLSRGFAACQALVSFILANVLPRRDT*

>peptide 4 (38 aa)
MSRRLIGSGLVKGTEPTGAVAKASLNRAIVTAYGPEPG*

>peptide 5 (68 aa)
MNGAKRSAEAVGCQNASVGERSALEGSNRESGGRRSGSENVGLSNENIGENPMPRKPKVSSARFVHGG*

>peptide 6 (66 aa)
MKQESLVIAGQPYGGESVPGKGVASDEMLRGVENKHRSGDSQIGQPFKLPAESMSRQETTWRTETS*

>peptide 7 (58 aa)
MASPWEITPMGRKRKALRDPPGPTLDTLRSFFKPALLPFKEKEFHVLPERKGGLGKSY*

>peptide 8 (54 aa)
MHFTAPPEIPLPLPYSSLVVSTALWGLNPGQAVETTKLEYGRGRGNFRWSGEMH*

>peptide 9 (47 aa)
MTSNMASSYSVTGGVYKARERIHRRMADRRLLAIPASCRRVAACNPN*

>peptide 10 (42 aa)
MSLVLLHPKRKKTSISKFSSDVAAFFLGVKKCQTKIPNKHKH*

>peptide 11 (30 aa)
MRPSHHAPYALGDTRATMGGTKGRDLARVS*

>peptide 12 (32 aa)
MSKCIGRGAFRLRGKQPRKRGSTKRKRECRLE*

>peptide 13 (29 aa)
MGHVESRVNQQGPPCKAKYSWVTDSEVVP*

>peptide 14 (29 aa)
NSSEPSGVCMKESDASSILFPGAAGPSWT*

>peptide 15 (74 aa)
MGSHLNRPIYPPEEKFVWFQTPIQTGGVRHANVPWMIHIFGSGADEHIELSMWLRALTAQAQRRNYQGRALPLS*

Sequence

>CNT30684661
CAAACTCCTCCGAGCCAAGTGGAGTATGCATGAAAGAGTCAGATGCTTCTTCTATTCTTTTCCCTGGCGCAGCTGGGCCATCCTGGACTTGAACCAGAGA
CCTCGCCCGTGAAGTAAATCATCGCCCCTACGATCCAACCAATTGGGAGAGAATCAATAGACTCCTTTTCGGGAGCGATTCATCCTTCCCGAACGCAGCA
TACAACTCCCCGTTGTACTGCGCTCTTCAAGTGTGCTTCTTCCCCCTTCTCCCTCTTACCATGGCAAGTCCTTGGGAAATAACTCCGATGGGCAGAAAAA
GGAAGGCGTTAAGAGACCCTCCTGGCCCAACCCTAGACACTCTAAGATCCTTTTTCAAACCTGCTCTGCTCCCATTTAAGGAAAAAGAATTTCACGTTCT
TCCTGAAAGGAAGGGAGGATTAGGAAAGTCCTATTGATTGCTGCTTTCTCCAGACCGCCGGGAAAAGCATGAAAAAAAGGCTCGAATGGTACGATCCCTC
CGTCACCCCAGAATGAAAGGGGTGATCTCGTAGTTCTTGGTCTGTGAAGATGCGTTGTTAGGTGCTCCATTTTCCCATTGAGGACGAACCTCAACCTGTG
CTCGAGAGATAGCTCTCCATACACTGATAAGGGATGTATGGATTCTCGAGAAGAGAGGAGCCGTGGTGGCCCCCCCCCGGACCGCCCGGATCCCACGAGT
GAATAGAAAGTTAGATCTACATGGGATCTCACCTGAATCGCCCCATCTATCCTCCTGAGGAGAAGTTTGTTTGGTTTCAAACTCCGATTCAAACAGGAGG
AGTACGCCATGCTAATGTGCCTTGGATGATCCACATCTTCGGGTCAGGCGCTGATGAGCACATTGAACTATCCATGTGGCTGAGAGCCCTCACAGCCCAG
GCACAACGACGCAATTATCAGGGGCGCGCTCTACCACTGAGCTAATAGCCCGTCGCGCGGGCCTCCCAAAGGGAGGCCTGCTACGCCAAAAGCGAGAAAA
ACTCCATCCCTTTCCTTTTGACATCCCCATGCCGCCACACCACAGGGGGGACATGGGGACGCCAAAAAAGGGATCCTATCACTATCAACTAATTTGTTAC
GACCTAGGATAATAAGCTCATGAGCTTGGTCTTACTTCACCCTAAACGAAAGAAGACTTCCATATCCAAGTTTAGCTCAGACGTAGCTGCCTTCTTTTTG
GGCGTGAAGAAGTGTCAAACCAAAATACCCAATAAGCATAAGCATTAGCTCTCCCTGAAAAGGAGGTGATCCAGCCGCACCTTCCAGTACGGCTACCTTG
TTACGACTTCACTCCAGTCGCAAGCCTAGCCTTAGGCATCCCCCTCCTTACGGTTAAGGGTAATGACTTCAAACATGGCCAGCTCCTATAGTGTGACGGG
CGGTGTGTACAAGGCCCGGGAACGGATTCACCGCCGTATGGCTGACCGGCGATTACTAGCGATTCCTGCTTCATGCAGGCGAGTTGCAGCCTGCAATCCG
AACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGAGATCGCGACCCTTTGTCCCGCCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCATG
ATGACTTGGCCTCATCCTCTCCTTCCTCCGGCTTAACACCGGCGGTCTGTTCAGGGTTCCAAACTCATAGTGGCAACTAAACACGAGGGTTGCGCTCGTT
GCGAGACTTAACCCAACACCTTACGGCACGAGCTGACGACAGCCATGCACCACCTGTGTCCGCGTTCCCGAGGGCACCCCTCTCTTTCAAGAGGATTCGC
GGCATGTCAAGCCCTGGTAAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGCGTTAGCTACAGCACTGCACGGGTCGAGTCGCACAGC
ACCTAGTATCCATCGTTTACGGCTAGGACTACTGGGGTCTCTAATCCCATTTGCTCCCCTAGCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTG
CTTTCGCCGTTGGTGTTCTTTCCGATCTCAATGCATTTCACCGCTCCACCGGAAATTCCCTTGCCCCTACCGTACTCCAGCTTGGTAGTTTCCACCGCCT
TATGGGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCATTGAGATCG
GAAAGAACACCAACGGCGAAAGCACTCTGCTGGGCCGACACTGACACCGAGAGACGAAAGCTAGGGGAGCAAATGGGATTAGAGACCCCAGTAGTCCTAG
CCGTAAACGATGGATACTAGGTGCTGTGCGACTCGACCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTACGTTCGCAAGAATGAA
ACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGTGCATGGCTGTCGTCAGCTCGTGCCGTAAGGTGTTGGGTTAAGTCTCGCAACGAGCGCAACCC
TCGTGTTTAGTTGCCACTATGAGTTTGGAACCCTGAACAGACCGCCGGTGTTAAGCCGGAGGAAGGAGAGGATGAGGCCAAGTCATCATGCCCCTTATGC
CCTGGGCGACACACGTGCTACAATGGGCGGGACAAAGGGTCGCGATCTCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTGCAGGCTG
CAACTCGCCTGCATGAAGCAGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCGGTGAATCCGTTCCCGGGAAGGGCGTAGCAAGCGACGAAATGCTTC
GGGGAGTTGAAAATAAGCATAGATCCGGAGATTCCCAAATAGGTCAACCTTTTAAACTGCCTGCTGAATCCATGAGCAGGCAAGAGACAACCTGGCGAAC
TGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGG
GAGAGCAATACAAGCGTTGTGCTGCTAGGCGAAGCGGTTGAGTGCCGCACCCTAGATGGCTAAAGTCCAGTAGCCGAAAGCATCACTAGCTTACGCTCTG
ACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGCGAAGTAGTACCGTG
AGGGAAAGTGATCTCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAACGGAACCCACCGGAGCCGTAGCGA
AAGCGAGTCTTAATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGATGAAACTAAGCAGAGGTCC
GAACCGACTGATGTTGAAGAATCAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTGGGGGTGCAAAGACAGCCAGGAGG
TTTGCCTAGAAGCAGCCACCCTTTAAAGAGTGCGTAATAGCTCACTGATCGAGCGCCCTTGCGCTGAAGATGAACGGGGCTAAGCGATCTGCCGAAGCTG
TGGGATGTCAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCAACCGCGAAAGCGGGGGTCGACGAAGCGGAAGCGAGAATGTCGGCTTGAG
TAACGAAAACATTGGTGAGAATCCAATGCCCCGAAAACCCAAGGTTTCCTCCGCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAA
AGGCGTAGTCGATGGACAACAGGTCAATATTCCTGTACTACCCCTTGTTGGTACGGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATAGGTTT
AAGGACACAAGGTGACCCTGCTTTTTCAGGGTAAGAAGGGGTAGAGAAAATGCCTCGAGCCGAGGTCCGAGTACCAAGCGCTGCAGCGCTGAAGTATGAG
CCCCGTGGACTAGCGATTGCTTCTCCACGAGGCTCATACCAGGCGCTACGGCGCTGAAGTATGTAACTGATGCCATACTCCCAGGAAAAGCTCGAACGAC
CTTCAACAAAAGGGTACCTGTACCCGAAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATA
GCCCCGTAACTTCGGGAGAAGGGGTGCCCCCT