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Detailed information on CNT30684658


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9BBU3|PSBA_LOTJA, E-value = 1e-128

BLAST vs NONCODE:
NONMTRT000175, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30300827Triticum urartuTriticum aestivum84.0151.2899.83583forward
CNT3089384Triticum urartuVigna radiata44.0937.6892.81306forward
CNT30540521Triticum urartuBrassica napus83.5743.4593.1580forward
CNT30555706Triticum urartuOryza glaberrima56.7757.5297.72394forward
CNT30360185Triticum urartuLactuca sativa44.8143.3894.53311forward

Expression of CNT30684658

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MELQQQLSLEGSCEHYVRALLPYQGTMHSTE*

>peptide 2 (34 aa)
MWNGCIRMLCSAWNTIIKLKVPEIPKGIPSEKLP*

Sequence

>CNT30684658
TTCAAAAATTCTTATATGTTAGCAGAAAACCTTATCCATTAATAGATGGAACTTCAACAGCAGCTAAGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTG
CATTACTTCCATACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATACACCAGCTACACCTAACATGTGGAATGGATGCATAAGGATGTTGT
GCTCTGCCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCATCAGAAAAGCTTCCTTGACCAATAGGGTAAATCAAGAAAAC
AGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGCT
ACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATC
CGATCGCCGCAGAAGTAGGGATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCACGAATACCATCAATATCTACTGG
AGGGGCAGCGATGAAGGCGATAATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGATTT