Detailed information on CNT30684516


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZRA9|TBB4_WHEAT, E-value = 5e-55

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696010Triticum urartuOryza sativa29.6628.2687.1878forward
CNT30677823Triticum urartuSetaria viridis36.8836.8898.9797forward
CNT30522590Triticum urartuSetaria italica68.4410.7798.33180forward
CNT30727960Triticum urartuCorchorus capsularis53.2327.9485140forward
CNT30397469Triticum urartuTriticum turgidum60.0813.3898.1158forward
CNT30204946Triticum urartuHelianthus annuus28.1419.7389.1974forward
CNT30721065Triticum urartuTriticum spelta36.1242.4189.4795forward
CNT30368464Triticum urartuSorghum bicolor66.1621.1795.4174forward
CNT30573622Triticum urartuVitis vinifera31.9430.8884.5284forward

Expression of CNT30684516

Peptides detected in this lncRNA

>peptide 1 (86 aa)
LEAVAVLGLLADDVEDGVDELGALGVVALGPVVAGAGLAEDEVVGAEDLAEGAGAHRVHEHGAGHEPSPARLVVVDVDPLQLQVRVP

Sequence

>CNT30684516
CCCTGGAGGCAGTCGCAGTTCTCGGCCTCCTTGCGGACGACGTCGAGGACGGAGTCGATGAGCTCGGCGCCCTCGGTGTAGTGGCCCTTGGCCCAGTTGT
TGCCGGCGCCGGACTGGCCGAAGACGAAGTTGTCGGGGCGGAAGATCTGGCCGAAGGGGCCGGAGCGCACCGAGTCCATGAGCACGGCGCGGGGCACGAA
CCGTCCCCCGCTCGCCTCGTTGTAGTAGACGTTGATCCGCTCCAGCTGCAGGTCCGAGTCCCC