Detailed information on CNT30684492


BLAST search results

BLAST vs Swiss-Prot:
sp|Q10HD0|CB23_ORYSJ, E-value = 1e-101

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30393441Triticum urartuTriticum turgidum71.4697.0798.16761forward
CNT30369818Triticum urartuOryza glumipatula48.3673.7888.35515forward
CNT30498674Triticum urartuDigitaria exilis34.7454.6587.57370forward

Expression of CNT30684492

Peptides detected in this lncRNA

>peptide 1 (80 aa)
MGNISSTYQMLWGALLTVRRMVMRPPKSPTLRTRSSRRGAVPRKLVVWCSADAAISLVAGAACELSEMNWWMVCDSLGGSP

>peptide 2 (71 aa)
MTHDSSIHSLVHTLCLINLHCAQLARGPLARSIMVQINTQSTCSYTLIHDVQVHMHISSDGRTDGRTAKHI*

>peptide 3 (46 aa)
MPFLDRISGNTHPRAPSIAHREWITSSSLFLANVSGSADNPAVSHP*

>peptide 4 (42 aa)
MACTKKPNMENMARRPFLSSFTLSSAAVSGMLCACTRLGLPR*

Sequence

>CNT30684492
CAGTTGATGATCTTGAGTAATGACACACGATTCTTCCATCCATTCCCTCGTGCACACCTTGTGCTTAATTAATTTACATTGCGCGCAGCTAGCGAGAGGA
CCTCTCGCTCGCTCGATCATGGTACAAATAAACACACAAAGTACGTGCAGCTACACGTTGATCCACGACGTACAAGTACACATGCATATCTCGTCCGATG
GACGGACGGACGGACGGACGGCTAAACACATTTAGCTTCCGGGGGCGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACCGGGTCGGCGACGTGGTC
GAAGAGGTTCTCAACTGGCCCCTTCCCGGTGACGATGGCCTGCACGAAGAAACCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGAGCTCCTTCACC
TTGAGCTCGGCGGCGGTGTCGGGGATGCTCTGCGCGTGCACCAGGTTGGGGTTGCCCAGGTAGTCGAGGCCGCCCTCGGAGAAGATCTGGGCGCCGGCCT
TGAACCACACGGCCTCGCCGAACTTGATGCCGTTCTTGGACAGGATCTCCGGGAACACGCACCCGAGGGCGCCGAGCATCGCCCACCGCGAGTGGATCAC
CTCCAGCTCCCTGTTCTTGGCGAACGTCTCGGGGTCAGCAGACAATCCGGCGGTGTCCCATCCGTAGTCGCCGGGGAACTCGCCGGTCAGGTACGACGGG
GTCTGCTCGGAGAACGGGCCCAGGTACTTGGGACGGTCAGGGCCGTACCTACACATCCATTCATTCATCAGCAAGGTGCATTAGTCCAATGGTGTATCTT
CATCAGGGGGAGCGAACCATGCATGGGAAATATTAGTAGTACGTACCAGATGCTCTGGGGCGCGCTCTTGACGGTCCGGCGCATGGTGATGCGGCCGCCA
AAGTCGCCGACGCTGCGGACGAGGTCATCGCGCCGCGGGGCGGTGCCGAGGAAGCTGGTCGTCTGGTGCAGCGCCGACGCGGCCATTTCGCTGGTGGCTG
GGGCTGCCTGCGAGCTCAGTGAGATGAACTGGTGGATGGTGTGTGATTCGCTCGGTGGATCACCT