Detailed information on CNT30684485


BLAST search results

BLAST vs Swiss-Prot:
sp|P0C524|CYB_ORYSJ, E-value = 2e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552006Triticum urartuOryza glaberrima5516.8898.32297forward
CNT30443845Triticum urartuAegilops tauschii73.8982.2798.25399forward
CNT3081844Triticum urartuBrassica juncea43.733.7693.64236forward
CNT30627910Triticum urartuDaucus carota26.8530.0290.34145forward

Expression of CNT30684485

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MRRGGHRISRYIIVGMPQNIRSKKNPNGKKDTKSYP

>peptide 2 (39 aa)
MVPPQVDIRSNLVVSNPPKATKIFLGESVENLNYAHTFL*

>peptide 3 (76 aa)
SSMAMAKRRNSPVHYMAMAKRRKGSGAMSLIRVIFWNSSSNSFRNGRYGKEQEEKDRRNLSNSNKWCLHRLTSDPT*

Sequence

>CNT30684485
TCTTCTATGGCTATGGCCAAAAGGAGAAATAGTCCTGTTCATTATATGGCTATGGCCAAAAGGAGAAAAGGATCCGGTGCGATGAGTCTCATCCGTGTAA
TATTTTGGAATTCCTCTTCCAACTCGTTCCGGAATGGGCGTTATGGCAAAGAACAAGAAGAAAAAGACAGAAGGAATTTGTCCAATAGTAACAAATGGTG
CCTCCACAGGTTGACATCCGATCCAACCTAGTAGTAAGCAATCCGCCAAAAGCAACCAAAATATTCCTTGGTGAATCGGTCGAAAACTTGAACTACGCAC
ATACATTTCTTTAAAAAAGGTAAAGCCAAGAGAGATATAAAAACTGGTGCTATTGCGGCTACACCTCCTGCTTTGTCAGGTATACTGCGAAGAATGGCAT
GGATCGGTAGGAAATACCATTCCGGCACAATATGAGGCGGGGTGGGCATCGGATTAGCAGGTATATAATTGTCGGGATGCCCCAAAACATTAGGAGCAAA
AAAAATCCAAATGGAAAAAAAGATACCAAAAGCTACCCAA