Detailed information on CNT30684469


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673851Triticum urartuSetaria viridis14.7334.9887.3271reverse complement
CNT30386814Triticum urartuTriticum turgidum68.8867.7699.7332forward
CNT30441907Triticum urartuAegilops tauschii12.2423.1488.1459reverse complement

Expression of CNT30684469

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MPVRANLHLHPYAPLITFAIQYANKLDAWMPVVSEVWL*

>peptide 2 (41 aa)
VENADECMVLDNKALYDICFRTLKLTTPSCGGMRTLSKRTS*

Sequence

>CNT30684469
GGTGGAGAACGCCGACGAGTGCATGGTGCTGGACAACAAGGCGCTCTACGACATTTGCTTCCGCACCCTCAAGCTGACCACACCTAGCTGTGGTGGAATG
AGGACACTCTCCAAGAGAACTTCTTAACACCAGACATCTGGGTGATAAGAAAGACCCCTCTTGGAAAATTGGACCAGGATATGTGGGTGTGATCCAGAAT
TTTATGCCTGTCAGGGCTAACTTGCACCTCCATCCCTACGCCCCTTTGATTACATTTGCAATTCAATATGCAAATAAGCTGGATGCTTGGATGCCCGTGG
TGAGTGAAGTATGGCTTTAGTCTGTCGGTTAAGCTGACTAACTGTTTCAAAATCTTGAACTAATGTTTTTTGTGACACCTGAACTGAAGTTGGTCATGCT
AACAAAACCTTCAACTTATTAGAACAGAAATTGTAACAACAGTTTAGCTTATTGTTCTGTGAAGTAACTACTGTTGTACCAG