Detailed information on CNT30684412


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695440Triticum urartuOryza sativa27.428.2190.2102reverse complement
CNT30616300Triticum urartuSesamum indicum27.427.0582.35102reverse complement
CNT30588133Triticum urartuMusa acuminata27.4212.6782.35102reverse complement
CNT30711Triticum urartuZea mays14.7822.8294.5555reverse complement
CNT30228849Triticum urartuAnanas comosus26.087.7782.4797reverse complement

Expression of CNT30684412

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MPLLLRITSSTAGEIPPVPASRCIRMDLIDFE*

>peptide 2 (40 aa)
LGTHVAASFAAGIVAAAASNPVDVVKTRVMNMKVFKDAEF*

>peptide 3 (53 aa)
AGHARGRQLRRGHRGRRRVQPRRRGQDQGDEHEGFQGRRVLMQCRPPRGTMNP*

Sequence

>CNT30684412
GCTGGGCACGCACGTGGCCGCCAGCTTCGCCGCGGGCATCGTGGCCGCCGCCGCGTCCAACCCCGTCGACGTGGTCAAGACCAGGGTGATGAACATGAAG
GTTTTCAAGGACGCCGAGTTCTGATGCAGTGCAGACCACCCCGCGGCACCATGAATCCATGATGATGATGACGACAAGAAGCCGCCATTGATGCCGCTGC
TGCTAAGAATAACTAGTAGTACCGCTGGAGAGATTCCTCCAGTTCCTGCCTCCCGTTGTATTCGGATGGATTTGATCGATTTTGAATGAAATTCTCATTT
TTAAATCTTGGGCCATGAATGTCAACTTTGAGAATCTTCCGCTAGGAATTGTCAGCATTGACAATATGCCAA