Detailed information on CNT30684315


BLAST search results

BLAST vs Swiss-Prot:
sp|O04867|GLNA1_ALNGL, E-value = 2e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30252858Triticum urartuAvena sativa20.72.8988.1459reverse complement
CNT301731Triticum urartuZea mays35.0917.2793100forward
CNT30369692Triticum urartuOryza glumipatula38.616.7991.82110forward

Expression of CNT30684315

Peptides detected in this lncRNA

>peptide 1 (82 aa)
ESLSVVRRCGRHWLLVAQSSEEEGGLGDHGGDDVGVHVGGRPAVLEVALAVLLRVAAHADGRAAVRHAPLEGVDVARHPQLV*

>peptide 2 (34 aa)
MDAPRSATPHLKVLMSRATHSWSEAAIPTDGPTWN

Sequence

>CNT30684315
TCGAGAGCCTAAGTGTCGTCCGGCGGTGTGGTAGGCATTGGCTGCTGGTCGCTCAGAGCTCAGAGGAGGAGGGTGGTCTCGGCGATCATGGAGGTGACGA
CGTAGGGGTCCATGTTGGAGGCCGGCCTGCGGTCCTCGAAGTAGCCCTTGCCGTCCTTCTCCGTGTCGCGGCCCACGCGGATGGACGCGCCGCGGTCCGC
CACGCCCCACTTGAAGGTGTTGATGTCGCGCGCCACCCACAGCTGGTCTGAGGCGGCGATCCCGACGGACGGCCCGACTTGGAAC