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Detailed information on CNT30684140


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3067156Triticum urartuLeersia perrieri29.4273.6191.92198forward
CNT30361799Triticum urartuSorghum bicolor45.323291.48305forward
CNT30603857Triticum urartuOryza punctata31.3524.2594.31211forward

Expression of CNT30684140

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MSTRTPREIFRVLIVRATGQAPGIFFRVF*

>peptide 2 (76 aa)
KTDEYSYASRNISSAHSTCYRTGSWHLLPSLLRQVKIDAVKIQRRKYGVDPVRTRGPVKPAGSGSNFFSLFAFFWC*

>peptide 3 (80 aa)
MRYGSTRLHADWSVPKPCDSTTTRSPVPTTRTFRICSSFAPLGAPPTIASPELDAGAGLLPPLPPPPLLLLLLGLRGCVDR

>peptide 4 (29 aa)
MPIMAETEWPTKAQRGMRSASRMASRSST*

Sequence

>CNT30684140
TGAAAACTGATGAGTACTCGTACGCCTCGAGAAATATTTCGAGTGCTCATAGTACGTGCTACAGGACAGGCTCCTGGCATCTTCTTCCGAGTCTTTTGAG
GCAAGTAAAAATCGATGCGGTAAAAATACAGAGAAGAAAATACGGGGTAGACCCCGTACGTACGCGCGGGCCGGTGAAACCAGCAGGCAGCGGCAGTAAT
TTCTTCTCTCTCTTTGCTTTTTTCTGGTGCTAGAACCGGGCGAGGATGCCGATCATGGCGGAGACGGAGTGGCCGACGAAGGCGCAGCGCGGGATGCGGA
GCGCGTCGAGGATGGCGAGCAGGTCGTCCACGTAAGCGTCCAGGTTGTTGTAGCGGCGGAAGTCGAAGTGGTCCGGGTTGACGCTGCCGGCGCAGACGAG
GTCGTAGAGCACCACGCGGTGCTCGCGGATGAGGTACGGCAGCACGCGGCTCCACGCCGACTGGTCCGTGCCGAAGCCGTGCGACAGCACCACCACGCGC
TCGCCGGTGCCCACCACCCGCACGTTCAGGATCTGCAGCAGCTTCGCCCCGCTCGGCGCGCCCCCCACCATCGCCTCGCCGGAGCTGGACGCCGGGGCCG
GGCTGCTACCTCCGCTGCCGCCGCCGCCGCTGCTGCTGCTGCTGCTGGGGCTGAGGGGATGCGTGGACCGGAG