Detailed information on CNT30684056


BLAST search results

BLAST vs Swiss-Prot:
sp|P12862|ATPAM_WHEAT, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618998Triticum urartuSesamum indicum48.477190.671158forward
CNT30200883Triticum urartuPisum sativum57.8595.2491.611382forward
CNT3091389Triticum urartuSolanum tuberosum4.4827.1693.46107forward
CNT30194088Triticum urartuSecale cereale41.11100.199.39982forward
CNT30397046Triticum urartuTriticum turgidum966.1598.14215reverse complement
CNT30543277Triticum urartuBrassica napus11.0543.1490.53264forward
CNT30212621Triticum urartuHelianthus annuus62.5485.5793.441494forward
CNT30596036Triticum urartuOryza meridionalis5.9953.1698.6143forward
CNT30481419Triticum urartuChara braunii12.1833.8485.57291forward
CNT30571978Triticum urartuVitis vinifera63.9233.1293.981527forward

Expression of CNT30684056

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MRAFHYRGNIPPWHTLNMGPEIAEEQDPKRWLLQEWNIPKHSLLKEFELIVPQSSVFVQSQHRHNTMSHSHLCPLSSFAFGLI*

>peptide 2 (62 aa)
MFFLRCSFLDFLLMIRSTLACTSIIFKYWVMRTTNLIHIITICKACHILKKMSCGLKIIRYR*

>peptide 3 (35 aa)
MAHPEYGARNCRGAGSEAVAATRMEYSKAFASERI*

>peptide 4 (55 aa)
MAFPAGTSTIDPVRLTRSPSLIAVSLPKTTIPTFSFSRFKAIPFTPLANSTISPA*

>peptide 5 (34 aa)
MPESQHQGLTQIERRRPLRDIVPIPVLNYRRLVS*

Sequence

>CNT30684056
AAGCCCAAAATGGCATAACCAAATGATTGTTTAGCCAATGATGGATTTCGCGCCACGGAATGAATCGAAGAACTGAGGACGTTTCCAATACCGACAGCAG
CTCCGGCTAATGCAATTGTAGCAGCTCCGGCACCTATTGATTTAGCACCTTCTAACATCTCGAGTCGAGAAAACACTTTTCTTGTCATGTTTTTCCTTCG
CTGTTCTTTCTTGGATTTCTTGTTGATGATTCGAAGTACTCTGGCCTGCACCTCCATAATTTTCAAATATTGGGTTATGCGGACCACTAATTTGATACAT
ATTATTACAATTTGCAAGGCTTGTCACATATTAAAGAAAATGAGCTGTGGATTGAAAATCATCAGGTATAGGTAATCATTAGGTATAGGTATAGGTAGGG
GGTCCGTCAACCCTTGTGGGGCTGGGTGGGGTATCCTGAACTACTGGAGCAGCTCCCCCTTCCTATTGGGGTTCAGTTGGCGAGAAAAGCCTTCTTCCTA
CATCTGCGAGTAAGGGGCAACCTTTTTTATTAATTCACAGGTAAGGCAAATTGCTTTCTTTTAAAGAAGCATCTCGTTCCATCTTTCTTTCGTTAGTTAA
GCCACCTTTTTCTAAGAAGGATTTTTGTAATTCAGGATTAATAGTACTTAGAATGGTTTTTTCATATTGAGAAATTCTGTCTAGTGGCATTCGATCACAG
AAGCCGTGACAGCAGCATAAATCACAACAATTTGTTTTTCAATTGGAAGTGGTTCATATTGTGGTTGTTTGGGCACTTCTGTAAGCCTTGCACCTCTATT
GAGTAATGCCTGAGTCGCAGCATCAAGGTCTGACCCAAATTGAGCGAAGGCGGCCACTTCGCGATATTGTGCCAATTCCAGTTTTGAACTACCGCAGACT
TGTTTCATAGCTTTCAACTGAGCGGCAGACCCGACGCGACTGACGGATAAGCCAACGTTAATAGCTGGTCTAATTCCGCGATAAAAGAGCTCTGTTTCCA
AACAGATTTGTCCATCTGTAATGGAGATCACATTGGTGGGGATATAGGCCGATACGTCTCCAGCTTGTGTTTCAATCACGGGTAACGCAGTCGAGCTACC
TGCACCTGTCTGGTCCGATCGTTTAGCGGCTCTTTCTAAGAGACGGGAATGTAAATAGAAAACATCCCCTGGGAAAGCCTCACGGCCTGGTGGTCGGCGT
AACAATAATGACATTTGTCGATATGCCACCGCCTGTTTACTTAGATCATCATATATAATTAATGCGTGCATTCCATTATCGCGGAAATATTCCCCCATGG
CACACCCTGAATATGGGGCCAGAAATTGCAGAGGAGCAGGATCCGAAGCGGTGGCTGCTACAAGAATGGAATATTCCAAAGCATTCGCTTCTGAAAGAAT
TTGAACTAATTGTGCCACAGTCGAGCGTTTTTGTCCAATCGCAACATAGACACAATACAATGTCTCACTCTCATTTGTGCCCCTTGAGTTCATTTGCTTT
TGGTTTAATATAGTATCGATAGCTATTGCAGTTTTTCCAGTTTGTCTGTCCCCGATTATAAGTTCTCGTTGACCACGGCCTATAGGAACCAGGCTATCCA
CTGCTTTTAAGCCTGTTTGCATGGGTTCGTGCACAGATTTACGTTCAATAATCCCTGGGGCTTTCACTTCGACACGTCTTCGTTCGTGATCGCTTAGAGC
CCCTTTTCCATCAATAGGTACTCCCAAGGCGTCGACCACACGGCCTAACATGGCCTTTCCCGCAGGAACATCCACAATAGATCCAGTGCGCTTGACAAGA
TCTCCTTCTTTAATAGCGGTATCACTACCAAAGACAACAATACCTACATTCTCATTCTCAAGATTTAAGGCGATTCCTTTCACACCGCTGGCAAATTCCA
CCATTTCTCCTGCTTGAATCTCGTTCAATCCATAAACACGTGCAATCCCATCTCCAACTGAGACCACTCGACCGATCTCATCCACTTGAAAATTCGTGTA
AAAGTTGGTCATTCTACTTTCCAATAGAGTCGTGAGTTCCGCAGCTCTGGGTGAGAATTCCATACTTTCACAAATTAGATGGATGATATTTTGAAGGGAG
AAATCCGCTTTCAAAGAAAAAGATCTTTACTTCACACAATCTCGATTTGAATTATCATTTGGTGAACCGGGCATCTCGGACAAAGACAATAACAAGAAGA
GATGGGAAGACCCTTCGCGGTCCTGCTCCCTGGTCTCTACCTTGCTTACCGCCCCTCATAGGGGCCAGCGTACCCATACCGAAAACGATTTACTCTTTTT
ATGGGCGCTTTCGACTAGGCTCTCGTTAAGGAATCGGCCCAAACAAGACCGAGATTCCCGCGAGAATTGCTACGCTGCCTGCAGTGAAA