Detailed information on CNT30683865


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522336Triticum urartuSetaria italica30.548.6891.47129forward
CNT30296550Triticum urartuTriticum aestivum98.8210094.74418forward
CNT30589135Triticum urartuMusa acuminata30.0233.0792.13127forward

Expression of CNT30683865

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MSGRMLNSVRLNSCTAAGTSAPTASGAYPLAHAS*

>peptide 2 (47 aa)
VLQDRLLASSSESFEASKNRCGKNTEKKIRGRPRTYARAGETSRQRQ*

>peptide 3 (59 aa)
TCYRTGSWHLLPSLLRQVKIDAVKIQRRKYGVDPVRTRGPVKPAGSGSNFFSLFAFFWC*

Sequence

>CNT30683865
ACGTGCTACAGGACAGGCTCCTGGCATCTTCTTCCGAGTCTTTTGAGGCAAGTAAAAATCGATGCGGTAAAAATACAGAGAAGAAAATACGGGGTAGACC
CCGTACGTACGCGCGGGCCGGTGAAACCAGCAGGCAGCGGCAGTAATTTCTTCTCTCTCTTTGCTTTTTTCTGGTGCTAGAACCGGGCGAGCGCGCGGCG
GAGCACCTGGGCGAGGAGGTCCGTCTTGAACACGCTCTGGCAGACGTGCAGCGAGATGTCCGGCCGCATGTTGAACAGCGTCCGGCTGAACTCCTGCACC
GCCGCCGGCACGTCCGCGCCCACCGCCAGCGGCGCGTACCCCTTGGCCCACGCCTCGTAGTTGGCCGACATCGCCTGGAACACCTGCTGGATCTCCTCCA
GCTCGAACCCGCCGTGGTAGTCG