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Detailed information on CNT3068379


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673536Leersia perrieriSetaria viridis8.6726.1192.4553forward
CNT30139060Leersia perrieriLolium perenne20.1332.3790.24123forward
CNT30604840Leersia perrieriOryza punctata37.8166.1990.91231forward
CNT30551969Leersia perrieriOryza brachyantha21.1114.5188.37129forward

Expression of CNT3068379

Peptides detected in this lncRNA

>peptide 1 (73 aa)
LVRDRVGDDKLLPSSLPLPHFLSFCIRLGLLPKKLYLLEELSTETLSKSSLMGEEGAEEALSRSRAEIFSDGV*

Sequence

>CNT3068379
CACTAGTGAGGGATCGTGTCGGTGATGATAAACTGCTTCCATCATCGTTGCCCCTTCCCCACTTCTTGAGTTTTTGCATCAGATTGGGCCTTTTGCCAAA
GAAGCTGTATCTGCTAGAAGAACTGTCAACTGAAACATTGTCGAAGTCTTCGCTTATGGGTGAAGAAGGTGCAGAAGAAGCACTTTCAAGGTCACGAGCA
GAAATTTTCTCGGATGGTGTCTGATAGTTGCGGAGCTCGTATCTGAGACAAGCATTAACCCAACGCAGGTCTGTAATCTCCATGAAATGAAATTTCAAGG
AAAAAAAAGGCTGGTAGCTTGCCCAAAACTATAAAGAATAGACATTCTATTTGGACTTTGGACTGAAGCCTGCTCTCTGCATGTATCCATCCTTGTCAAT
GCAAAATAAATCTGCTGCAATTTGCACCCATCCAAACAATCAGTTGCTGCTCAACTAACTCTACTGGCCGGCTACTCATTAGCACCTGCTAATACCATCT
GATTCTAAACAAGTTGCAGAAATGTAGCTGCTGTCACCGTTCATGCAGCACAGGTTTTTGGCCCCGGTATAATAGAAAACCAGGACACCAATGAGGACAG
AGGCAATCGGC