Detailed information on CNT30683778


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697733Triticum urartuOryza sativa32.0626.7999.01101reverse complement
CNT30526003Triticum urartuPhaseolus vulgaris43.4913.9994.89137forward
CNT30509771Triticum urartuSolanum lycopersicum32.79.8390.29103reverse complement
CNT30650379Triticum urartuRosa chinensis25.7110.4495.0681reverse complement
CNT30339731Triticum urartuEragrostis tef32.0630.1597.03101reverse complement

Expression of CNT30683778

Peptides detected in this lncRNA

>peptide 1 (67 aa)
LIKLLPQQLANQTRAPPWADFSFCSSAYGVLATVSSCCSPPKGRFLRVTHQKAKEQKEKSAQGGARV*

Sequence

>CNT30683778
TCCTAATTAAGCTATTACCTCAACAACTAGCTAATCAGACGCGAGCCCCTCCTTGGGCGGATTTCTCCTTTTGCTCCTCAGCCTACGGGGTATTAGCAAC
CGTTTCCAGTTGTTGTTCCCCTCCCAAGGGCAGGTTCTTACGCGTTACTCACCAAAAAGCTAAGGAGCAAAAGGAGAAATCCGCCCAAGGAGGGGCTCGC
GTCTGATTAGCTAGCGGTTGAAGTAGATTCTTCTTTTCTCTCAAAAAACCCCTTCCCAAACTGTACAAGCTTCTTCCAAAGCATACGGCTTTCTAGATGT
ATATGACGATCTCTA