Detailed information on CNT30683762


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3099603Triticum urartuOryza rufipogon45.9311.7192.74372reverse complement

Expression of CNT30683762

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MTYLIRLKLMSKTRSFTSIEAGRKGAEATV*

>peptide 2 (41 aa)
MLGSAGSSSSSEKKTETKQICFNDISNQTEIDVEDTIIHIN*

>peptide 3 (30 aa)
ICFCAMTISLELQGPTHISTVIRIRPIETS*

>peptide 4 (57 aa)
MNRTSTSSVTPTTLTALYPNPTCSGPGSSRISSSVNGPWKLGSICLGLIENCISFPS*

>peptide 5 (42 aa)
MQCKQGSLLTLHLACVGGKEGGIGKTRPYTLISTRKRHSGSD*

>peptide 6 (75 aa)
MFPTIHENIIPNYEPYEHILCHPHYAYGSIPQPNLLWAWVLPHLFLGKRTVEAGEYLLGTDRKLHIFSLLTPIKI*

Sequence

>CNT30683762
TATCTGCTTTTGCGCCATGACAATCTCACTCGAATTACAGGGACCTACACATATTAGTACAGTAATAAGAATAAGACCAATAGAGACTTCATAAGGGAAC
ATTTGAGCTGCAGATCATAATGCTCCTAGAAAGGCATATTTCGAATATAGAGGATGTTCCCAACAATCCACGAGAATATCATACCCAACTATGAACCGTA
CGAGCACATCCTCTGTCACCCCCACTACGCTTACGGCTCTATACCCCAACCCAACTTGCTCTGGGCCTGGGTCCTCCCGCATCTCTTCCTCGGTAAACGG
ACCGTGGAAGCTGGGGAGTATCTGCTTGGGACTGATAGAAAACTGCATATCTTTTCCCTCCTGACCCCTATAAAAATCTAGTGGAAGTCCGGTCGCGTCG
GAGACATCTTTATCTGATTTTGAGGCTTCGTCGTCCGGCTCCTCCAAAATTATGTTAGGATCGGCTGGCTCATCCTCATCATCCGAAAAGAAAACAGAGA
CAAAACAGATTTGTTTCAATGACATATCTAATCAGACTGAAATTGATGTCGAAGACACGATCATTCACATCAATTGAAGCAGGCAGGAAGGGCGCGGAAG
CTACCGTTTAACGAATGCAATGCAAGCAAGGTAGCTTGCTTACTCTCCATCTAGCGTGCGTTGGCGGCAAGGAAGGAGGCATTGGAAAGACTAGACCATA
CACATTAATTAGTACAAGAAAGAGGCATTCGGGAAGCGACTAGTCGCTTCTGGCGAAGCTTAACAAAGGCCGACTACTACATAGAGACAACTACTACCAG
TCATGAGCGA