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Detailed information on CNT30683749


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30183480Triticum urartuSecale cereale23.8951.5598150forward
CNT30391361Triticum urartuTriticum turgidum25.6452.61100161forward
CNT30137691Triticum urartuLolium perenne12.262588.3177reverse complement

Expression of CNT30683749

Peptides detected in this lncRNA

>peptide 1 (88 aa)
QMQALVTTSAKSFSVFPLSNTRPLTGKFVSFDTFTPLFSAHLARGIFLVVGQHRRNPLNRQLHLHLLRTALTISSAVSTAYRMLLTTT*

>peptide 2 (31 aa)
PNASVGNHISQILQCVPSLKHQTSHGEICQF*

Sequence

>CNT30683749
GCCAAATGCAAGCGTTGGTAACCACATCAGCCAAATCCTTCAGTGTGTTCCCTCTCTCAAACACCAGACCTCTCACGGGGAAATTTGTCAGTTTTGACAC
CTTCACTCCACTATTCAGCGCACACTTGGCAAGGGGGATCTTCTTGGTAGTTGGACAGCACCGTCGGAACCCTCTTAATCGTCAGCTTCATCTCCATCTC
CTCCGGACTGCTCTTACAATCTCCTCTGCTGTATCTACCGCGTACCGGATGTTGTTAACGACGACTTAGCGTGGGTTAGCACTTAGCAGTCAGCGCCGCC
GCGCAATCAGAGAAGGAGGCGACCGCCGCCGGCGAGGAAGAGGAGGTCGGAGGGGCTGCCCCCGGCCGAGGGGAGTGCTCCGCGTCCTCCGTGCGGCTCC
ACCTGCGCAGCGGGGGCGCCGCGCGCGGGGTCCGCGGAAGCAGCCGTGATGCCCGGAGAGACAAACCGGAGGGCGGGAGGGGGGAGGAGCCGAGCGTCCC
GGAAGGCTACGGAGGGCTGCAAGGGAAGGAAGTAAGACCTCCCGGCCGGGCTGCCCGCGTCCCTTCGGGGACGACGGCGGACGGCGTGGACGGCGAGGTG
GCTGGTTTGTGGCTGGGCTGCGTCGGCG