Detailed information on CNT30683546


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30447830Triticum urartuSaccharum spontaneum57.2937.7685.65216forward

Expression of CNT30683546

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MSGRMLNSVRLNSCTAAGTSAPTASGAYPLAHAS*

>peptide 2 (46 aa)
LQDRLLASSSESFEASKNRCGKNTEKKIRGRPRTYARAGETSRQRQ*

>peptide 3 (57 aa)
YRTGSWHLLPSLLRQVKIDAVKIQRRKYGVDPVRTRGPVKPAGSGSNFFSLFAFFWC*

Sequence

>CNT30683546
CTACAGGACAGGCTCCTGGCATCTTCTTCCGAGTCTTTTGAGGCAAGTAAAAATCGATGCGGTAAAAATACAGAGAAGAAAATACGGGGTAGACCCCGTA
CGTACGCGCGGGCCGGTGAAACCAGCAGGCAGCGGCAGTAATTTCTTCTCTCTCTTTGCTTTTTTCTGGTGCTAGAACCGGGCGAGCGCGCGGCGGAGCA
CCTGGGCGAGGAGGCTGGGGGCGCTGAGGTCCGTCTTGAACACGCTCTGGCAGACGTGCAGCGAGATGTCCGGCCGCATGTTGAACAGCGTCCGGCTGAA
CTCCTGCACCGCCGCCGGCACGTCCGCGCCCACCGCCAGCGGCGCGTACCCCTTGGCCCACGCCTCGTAGTTGGCCG