Detailed information on CNT30683520


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30176909Triticum urartuSecale cereale35.1364.988.87503forward
CNT30298208Triticum urartuTriticum aestivum51.8278.0287.87742forward
CNT30661507Triticum urartuTriticum dicoccoides47.6379.9589682forward

Expression of CNT30683520

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MFPALQQILQLWKLIGVHACYDTELDHCAGCMYAEAGA

>peptide 2 (35 aa)
CTIVRAGLPAGPIVAQHMSPWTPPLNKQIMFCLIC*

>peptide 3 (35 aa)
MLVHVRGQFSIDPDLFFCDPQWRGERMWEILAAVR*

>peptide 4 (30 aa)
MNFGGFGSLVLFLCQSFDLSCRIISLGIFP*

>peptide 5 (29 aa)
MDDEVAGAPSMPKNTVDAGPRERAILYRS*

>peptide 6 (40 aa)
MGFASFDSAFSEWLKHQGRKLRLWAIGYHYGLRRRNTGAA*

>peptide 7 (47 aa)
MLTLCDWATILPHRVRWDLPPSILPSVSGSSIKEGNYACGLLATTMD*

>peptide 8 (62 aa)
MPPFPSWSDQIPWRRWGTAGLQPAVQRCFSGMPQEVVQAHIKTGARLRLIEQRFKTQQQTYG*

Sequence

>CNT30683520
CCTGCACGATAGTGCGTGCAGGGCTCCCAGCAGGGCCAATCGTTGCGCAACACATGTCCCCGTGGACCCCACCACTTAATAAACAGATTATGTTTTGTTT
AATTTGCTGAAAAGTCATTTGCCTTGCTTTATTTGCCCCGGACGCTTTGAGCTAGTTCCATTATTCCATTGAACTGAGCTCCGTGAGTGAGAGAGAGAGT
TCCAGAAAGTGAGGTCCGCCGTCCGACGGTGTCGTGGTCGCGGCGAGCGACAGAGGAAGCAGTCACGGTTGCCGCTGCCTGACTCCGGCGCGCCCAAGCC
CCGGCCAAAGCTGGAGCAGCTGCTCTGGCATGCCGCCGTTCCCCTCCTGGAGCGACCAGATCCCTTGGAGAAGGTGGGGAACTGCAGGGCTGCAGCCGGC
GGTGCAGCGCTGCTTCTCCGGGATGCCGCAGGAGGTCGTACAGGCGCACATCAAGACGGGAGCCCGACTCAGACTCATCGAACAGAGATTCAAGACACAA
CAACAAACTTATGGATGATGAAGTCGCGGGAGCTCCTTCCATGCCTAAGAACACCGTAGATGCTGGTCCACGTGAGAGGGCAATTCTCTATCGATCCTGA
TCTATTCTTCTGTGATCCACAATGGAGAGGAGAAAGGATGTGGGAGATTTTGGCGGCAGTCCGTTGATACGCGGGAGAAAGAAAGGCAGTTTTGCTGATT
TTTCGTAATTACAGAGATAGGGTGTGATTGTTTTAGTGGTCGGGTCCACCAGGCCACGTGTTGGCCGCTGGTTGGCCCTGCACGATAGTGCGTGCAAGGA
TCCCAGCAGGAGAGCCTGACCCCTGGTCTTGGTTCAAGTTGGACCAACCCACCATGCTCACCCTATGTGATTGGGCGACTATTCTGCCTCATCGTGTTAG
ATGGGATTTGCCTCCTTCGATTCTGCCTTCAGTGAGTGGCTCAAGCATCAAGGAAGGAAATTACGCTTGTGGGCTATTGGCTACCACTATGGACTAAGGA
GAAGAAACACGGGAGCAGCCTAGCTTGGTCCAATTAAGGGCTCCTTTGATTTAGGAGAGTTTTACATGAATTTTGGAGGATTTGGATCCCTAGTTTTGTT
CCTGTGTCAGTCGTTTGATTTGAGTTGTAGGATTATATCCTTAGGAATTTTTCCTTAAGATTTGTTTGCACTCTGTTTGAAATAAAATTTTCAATCCCTC
AAACTTCCTCCATCCAAATTTCTATAGGATTCAAGATGACATGACACTCTAATTTCATTTATCCTATTCCAACATTGTGAGAATCTTTTGAACAAGCCGA
TTTTTTAGCTAGATCAATGTTCCCGGCGTTGCAGCAAATTTTGCAACTTTGGAAGCTCATTGGAGTTCATGCATGCTACGACACCGAGCTCGACCACTGC
GCAGGGTGCATGTATGCAGAGGCCGGTGCATG