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Detailed information on CNT30683374


BLAST search results

BLAST vs Swiss-Prot:
sp|Q10QA5|D14_ORYSJ, E-value = 1e-47

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30579178Triticum urartuEchinochloa crusgalli83.5531.5191.71386forward

Expression of CNT30683374

Peptides detected in this lncRNA

>peptide 1 (30 aa)
AVISSLSLLFSGARTGRARGGAPGRGGWGR*

>peptide 2 (29 aa)
MPIMAETEWPTKAQRGMRSASRMASRSST*

>peptide 3 (56 aa)
MRYGSTRLHADWSVPKPCDSTTTRSPVPTTRTFRICSSFAPLGAPPTIASPELDAGA

Sequence

>CNT30683374
CGGCAGTAATTTCTTCTCTCTCTTTGCTTTTTTCTGGTGCTAGAACCGGGCGAGCGCGCGGCGGAGCACCTGGGCGAGGAGGCTGGGGGCGCTGAGGTGG
GGGAGGATGCCGATCATGGCGGAGACGGAGTGGCCGACGAAGGCGCAGCGCGGGATGCGGAGCGCGTCGAGGATGGCGAGCAGGTCGTCCACGTAAGCGT
CCAGGTTGTTGTAGCGGCGGAAGTCGAAGTGGTCCGGGTTGACGCTGCCGGCGCAGACGAGGTCGTAGAGCACCACGCGGTGCTCGCGGATGAGGTACGG
CAGCACGCGGCTCCACGCCGACTGGTCCGTGCCGAAGCCGTGCGACAGCACCACCACGCGCTCGCCGGTGCCCACCACCCGCACGTTCAGGATCTGCAGC
AGCTTCGCCCCGCTCGGCGCGCCCCCCACCATCGCCTCGCCGGAGCTGGACGCCGGGGCCGG