CANTATAdb - search

Detailed information on CNT30683269

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30576588	Triticum urartu	Oryza barthii	23.38	29.61	99.23	130	reverse complement

Expression of CNT30683269

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGESLTEQCRVEVEGLRVVNFFSRRRNNDGI*

Sequence

>CNT30683269
CGGCTGACCGGCGATTACTAGCGATTCCTGCTTCATGCAGGCGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCG
AGATCGCGACCCTTTGTCCCGCCCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCACCTGGAGCTGTAGGTGGTTCCAAGGGTTGGGC
TGTTCGCCCATTAATGCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACATTCGGTCCATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCC
TAGTACGAGAGGACTAGGAAGGACGCACCTCTGGTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAA
AGCCTGACGGAGCAATGCCGCGTGGAGGTGGAAGGCCTACGGGTCGTCAACTTCTTTTCTCGGAGAAGAAACAATGACGGTATCTGAGGAATAAGCATCG
GCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCGGATT