Detailed information on CNT30683236


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30246978Triticum urartuAvena sativa21.3819.4294.2587forward
CNT30457028Triticum urartuSaccharum spontaneum25.3120.7289.32103forward
CNT304788Triticum urartuZea mays24.0822.6383.6798forward
CNT30344056Triticum urartuEragrostis tef25.3111.0993.2103forward
CNT30361298Triticum urartuSorghum bicolor24.5728.5791100forward
CNT30100848Triticum urartuOryza rufipogon24.0825.9389.898forward

Expression of CNT30683236

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MYHAQMEMLLGMPLAVRPAAAPLWSEVLG*

Sequence

>CNT30683236
GCGAGTATGCTTTATTTATGGGCAAATGGAGGGTGAGGATTAACAGTTTAAGACCAGGATCGAACAATTGCTGACACAAGCTCACACACACACTGCACCA
GTCTCTCGACACGTTCCCGTACGTGGCGAACGAGTCGCACTCTCTTTATTCGGACGCACACGCGCTGTGGTTGGCGTCAGACGAGACGAAGCTCCGATGT
ACCATGCTCAGATGGAGATGCTGTTGGGGATGCCCTTGGCGGTGAGGCCGGCGGCGGCACCCTTATGGTCGGAGGTGTTGGGGTAGAGCAGCATGTAGGG
GAACTTGGCCCTGCTCGGTGAACTTCCAGTCCTTGTACACCACGGACGACATCCCCAGCGCGAACTTGCCCGGGAACACCGTCATCTCGAAGATGCCGCC
GGCGTTG