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Detailed information on CNT30683166


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673415Triticum urartuSetaria viridis8.862110042forward

Expression of CNT30683166

Peptides detected in this lncRNA

>peptide 1 (43 aa)
YRLNHGRFYLGVGLHAWECTCSAHAGRCLHTYKDPRSGSVTWY*

>peptide 2 (51 aa)
MHGSAPALLMLAGAYIHTKTLDQVALHGTRWMDGSIIDMMHARGACMIDDQ*

>peptide 3 (52 aa)
MTDDLAAAAGAATAGAALALGAAAAGAALALGAAAAAVLGRHLHAAGAPARTP

Sequence

>CNT30683166
TATAGGTTAAACCACGGGAGATTTTATTTAGGGGTCGGTTTACATGCATGGGAGTGCACCTGCTCTGCTCATGCTGGCAGGTGCTTACATACATACAAAG
ACCCTCGATCAGGTAGCGTTACATGGTACTAGATGGATGGATGGATCGATCATAGATATGATGCATGCGCGCGGTGCATGCATGATCGATGATCAATGAT
CTAGCAGCTGCAGCAGGAGCAGCCGCAGCTGGTGCCGCACTTGCACTGGGTAGCGTTACATGGTGGTAGATGGATATATAGATAGATCATAGATATGAGG
CACGCGGTGCATGCATGACCGATGATCTAGCAGCTGCAGCAGGAGCAGCCACAGCTGGTGCCGCACTTGCACTGGGAGCAGCCGCAGCTGGTGCCGCACT
TGCACTGGGTGCAGCCGCAGCCGCCGTTCTCGGCCGCCATCTCCATGCCGCCGGAGCTCCTGCACGTACCCCAT