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Detailed information on CNT30683149


BLAST search results

BLAST vs Swiss-Prot:
sp|P23993|PSAL_HORVU, E-value = 2e-53

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672548Triticum urartuSetaria viridis55.5338.9291.06246forward
CNT30520857Triticum urartuSetaria italica46.2821.7292.2205forward
CNT30639966Triticum urartuNymphaea colorata34.0910.0682.78151forward
CNT30533956Triticum urartuEucalyptus grandis34.9922.2183.87155forward
CNT30629841Triticum urartuVigna unguiculata38.8329.483.72172forward
CNT30182270Triticum urartuSecale cereale37.2529.8998.18165forward
CNT30292923Triticum urartuTriticum aestivum46.590.3597.09206forward
CNT30222283Triticum urartuHordeum vulgare30.732.3897.79136forward
CNT30390478Triticum urartuTriticum turgidum57.5621.3996.47255forward
CNT30564216Triticum urartuActinidia chinensis35.4470.483.44157forward
CNT3084712Triticum urartuVigna radiata29.5746.2983.21131forward
CNT30555733Triticum urartuOryza glaberrima21.446.6894.7495forward
CNT30438727Triticum urartuAegilops tauschii31.3843.9998.56139forward
CNT30247486Triticum urartuAvena sativa56.6642.1193.23251forward
CNT30662078Triticum urartuTriticum dicoccoides31.8348.6296.45141forward
CNT30261201Triticum urartuBrassica rapa28.4414.1981.75126forward
CNT304588Triticum urartuZea mays37.712.9593.41167forward
CNT30610860Triticum urartuGossypium raimondii14.2221.3687.363forward
CNT30129085Triticum urartuCorymbia citriodora34.9914.7284.52155forward
CNT30720963Triticum urartuTriticum spelta31.625.1397.14140forward
CNT30344816Triticum urartuEragrostis tef34.9936.4790.97155forward
CNT30597198Triticum urartuOryza meridionalis21.447.0996.8495forward
CNT30319122Triticum urartuAsparagus officinalis40.1812.0488.76178forward
CNT30582252Triticum urartuEchinochloa crusgalli51.9234.990.43230forward
CNT30556995Triticum urartuPanicum hallii51.0232.1593.81226forward
CNT30551919Triticum urartuOryza brachyantha22.356.3592.9399forward

Expression of CNT30683149

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MPRRSGLTAVRYAGRLERYHATRGLEVTGVSRLPMNGSPLMGWTTWYVP

>peptide 2 (81 aa)
PCYNTQYHPCKGSEEYVNSFIHRLFQATIKKRSHHLHPSYMPNNNHLLEEVWEVEHVEEEVGRWRRGFPPGRELACCGAGR*

Sequence

>CNT30683149
TCCCATGTTATAATACGCAGTATCATCCATGCAAAGGTTCTGAGGAATACGTAAATTCATTTATACATAGACTCTTTCAAGCAACCATCAAGAAGAGATC
ACATCATCTGCACCCATCGTACATGCCAAACAATAATCATCTACTTGAAGAAGTATGGGAGGTCGAGCACGTAGAGGAGGAAGTAGGCCGATGGCGCCGA
GGGTTCCCGCCTGGCCGTGAATTGGCGTGTTGCGGAGCGGGCCGGTGAGCGCGAAGGGGCCGACGAGGAGATAGCCGTGGGCGAGGCCGACCTCGATGCC
GCGGAGGAGCGGGCTGACGGCGGTGCGGTACGCGGGGAGGTTGGAGAGGTACCACGCGACGAGGGGGCTGGAGGTGACGGGCGTCTCCAGGCTGCCGATG
AACGGGTCGCCGTTGATGGGCTGGACCACCTGGTACGTCCCCT