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Detailed information on CNT30683107


BLAST search results

BLAST vs Swiss-Prot:
sp|P05698|RBL_HORVU, E-value = 1e-122

BLAST vs NONCODE:
NONORUT000577, E-value = 5e-82

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677554Triticum urartuSetaria viridis15.5162.6997.02168forward
CNT30201082Triticum urartuPisum sativum34.8163.986.47377forward
CNT30146680Triticum urartuMedicago truncatula34.8130.0986.74377forward
CNT30443410Triticum urartuAegilops tauschii25.12100100272forward
CNT30627897Triticum urartuDaucus carota24.8417.8787.73269forward
CNT30622174Triticum urartuCajanus cajan35.6453.0287.31386forward
CNT30596588Triticum urartuOryza meridionalis21.4210095.26232forward

Expression of CNT30683107

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MDKLHNRSIGCLPQQQARCDSIVLCNDQDW*

Sequence

>CNT30683107
TTTGTTTCTTTTTTATTTATACCTTCTTTATCTTTAGTTTTATCTAGTTAATCAATAGTATCTACCGGCTCGAACTCGAATTTGATCGCCTTCCATACTT
CACAAGCTGCGGCTAGTTCAGGACTCCATTTGCAAGCTGCTCGGATAATTTCATTACCTTCGCGAGCAAGATCGCGCCCTTCGTTACGAGCTTGTACACA
GGCTTCTAAAGCCACTCGATTAGCTGCTGCACCAGGTGCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACCAAATTGTAATACAGAATCGTCCCCAAAG
ATTTCGGTCAGAGCTGGCATATGCCAAACATGAATACCACCTGAAGCTACCGGTATAACACCTGGCATGGATACCCAGTCCTGAGTGAAAAAGATACCGC
GAGCACGATCTTTTTCAATAAAATCATCGCGCAATAAATCAACAAAACCTAAAGTCATTTCGCGAACCCCTAATTCTCTTGCAAATACAGCTCTCTTAAT
CATTTCTTCACATGTACCCGCAGTCGCATTCAAGTAATGCCCCTTGATTTCACCGGTTTCGGCCTGTGATTTATAAATAGCTTCGGCACAAAAGACAAAA
CGGTCTCTCCAGCGCATAAATGGACGACCGTACTTGTTCAACTTATCTCTTTCAACTTGGATACCATGAGGCGGGCCTTGGAAAGTTTTTGAATAAGTAG
GGGGAATTCGTAGATCCTCCAAACGTAGAGCACGTAGGGCTTTGAAACCAAATACGTTACCTACAATGGAAGTAAACATGTTAGTAACGGAACCCTCTTC
AAATAGGTCTAATGGATAAGCTACATAACAGATCCATTGGTTGTCTTCCCCAGCAACAGGCTCGATGCGATAGCATCGTCCTTTGTAACGATCAAGACTG
GTAAGTCCATCAGTCCAAACAGTTGTCCATATATCAGTATCCTTAGTTTCATACTCTGGGGTGTAGTAAGTCAATTTATAATCTTTAACACCAGCTTGAA
ATCCAACACCTGCTTTAGTTTCTGTTTGTGGTGACATAAGTCCCTCCCTATAACTCTTGAATTAAGAATTCTCACAATAACAG