Detailed information on CNT30683092


BLAST search results

BLAST vs Swiss-Prot:
sp|Q37680|NU5M_WHEAT, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30403755Triticum urartuBeta vulgaris6.220.9291.24137reverse complement
CNT30223386Triticum urartuHordeum vulgare26.0156.3299.65575forward
CNT30389925Triticum urartuTriticum turgidum63.5910099.221406forward
CNT30592666Triticum urartuMusa acuminata9.1820.8691.13203forward
CNT3089649Triticum urartuVigna radiata33.289.9593.73734forward
CNT30511946Triticum urartuSolanum lycopersicum13.4856.6595.64298forward
CNT30171414Triticum urartuTrifolium pratense4.4828.4586.8799reverse complement
CNT30439298Triticum urartuAegilops tauschii21.2648.8198.94470forward
CNT30207123Triticum urartuHelianthus annuus3.6631.6496.381reverse complement
CNT30104537Triticum urartuOryza rufipogon5.4739.6799.17121reverse complement
CNT30575766Triticum urartuOryza barthii7.8223.2597.69173forward
CNT30725625Triticum urartuLupinus angustifolius74.1394.25951639forward

Expression of CNT30683092

Peptides detected in this lncRNA

>peptide 1 (94 aa)
RRSPGHSIVLSGSGRLVHGPLDGRCKARNWNTLILLVPVLRFRACPSVWSVLHTVGQQSLHLFTYYDGSPGPLSSSLFCSLVGVQTPTKGEGVD*

>peptide 2 (54 aa)
MTLFRSFCNIPVVAARNDVIAPAKVITIKAVGEYSNKGEHLAIMKTPAVTIVAA*

>peptide 3 (36 aa)
MSEQAWQKKYGLAFLCHSSVRHLPCLGPFFPSLIQK*

>peptide 4 (63 aa)
MNVTTINITTVRLSNTESKVNYESGQSANRASSPCNDVVVNLSFVFSALRTVREGFPSHGSPT*

Sequence

>CNT30683092
GGCGGCGGTCCCCTGGACATAGCATAGTCCTTTCAGGCAGTGGCCGTTTAGTCCATGGTCCGTTGGATGGTCGGTGCAAGGCCAGAAATTGGAACACATT
GATTCTGCTCGTTCCTGTCCTTCGCTTCAGGGCCTGTCCCTCGGTGTGGTCAGTACTCCATACTGTCGGGCAGCAAAGCTTACACTTGTTCACTTATTAT
GACGGTTCACCAGGGCCTCTTTCCTCCTCCCTTTTCTGCTCACTCGTAGGGGTCCAGACCCCCACAAAGGGGGAGGGAGTCGACTGAACATCTCAGCCAT
TGGCGGGAATTTCGCCCGCATCCGATCCCCAATTCTTGTTCACCCTAGATGATCATTTTTGGTAAATTGTGACCTCGTACGATCGTATCGGGTGAGCAAC
AGCCGCTTCGTCACAGTACTGACTTATGGGCTAACAGGTCACACTTTGGCCAAGTATCCTACAAAGAGACTCCCGAGAGCCAAAAGTATTAAAGGAATGG
CCATAGGAATGGGCGCATCATGACATCGTAATCTGTCTCGCCCGAATGAATTAGTTGGTACTAGAAATGTTAGAAATAGTAAACGAAAGGAGTAATAAGA
AGTGAAAAGGACAGAGACACTTCCCAACCAGAAAGCAAAGTTCCCACTGATGGTATACTTTGTGTAAGCGAGCTCTAAGATCACATCTTTAGAATAAAAT
CCTGTTAGAAAAGGAAATCCAATAAGAGATAAGCTGCCCATGAGCATCATGGCATAGGTCAAAGGAAAGGAGGAGGCAAGCCCCCCCATCTTCCGCATAT
CTTGCTCATCCGACATGGCATGAATCACCGAACCCGCACTCAGGAAGAGTAATGCTTTGAAAAACGCGTGATTCATTAAGTGAAAGACGCTAACCGAATA
GTTAGAGATGCCGCAAGCAAAGATCATATAGCCTAATTGACTGCAAGTTGAATAAGCTATGACCCTCTTTAGATCGTTCTGTAATATTCCAGTGGTTGCC
GCAAGGAATGACGTCATAGCTCCTGCAAAAGTAATAACAATCAAAGCCGTAGGTGAGTATTCAAATAAAGGGGAGCACCTTGCTATCATGAAAACGCCAG
CAGTGACCATAGTAGCTGCATGAATCAAAGCAGATACTGGAGTGGGACCCTCCATTGCATCGGGTAACCAAGTATGCAATCCTATCTGTGCAGATTTCCC
AACAGCACCAATAAAAAGTAAAATACAAATCAGAGTTATGGCATTCAATCTCATATTGCAAAAAATCCATTCATTTCTGGGAGCACTAGCACAAGCAAAA
ATGGTTGAAAAGTCTACTGTTTGAAAGAGAGTAAAACAACCAAAAATCCCAAGAGCTAATCCAAAATCACCTACTCGATTGACAAGCATAGCTTTTATAG
CAGCTTTATCCGCCTGAAGTCGTGTAAACCAGAAATGAATTAACAAATATGAAGCAAGACCTACTCCCTCCCATCCCAGGAATAATTGAAGAAAGTTATC
TCCAGTCACCAACATTAGCATAAAAAAAGTAAAAATGGATAAATAACACATAAATCGAGGGCTATGCGGATCCTCAGACATATATGAAATGGAATAAAGA
TGGACCAAGCTACTTATGAATGTAACCACAATTAACATCACTACGGTCAGGCTATCGAACACAGAGTCAAAAGTGAATTACGAGTCAGGCCAATCTGCGA
ATCGAGCGAGCTCCCCTTGCAATGATGTGGTGGTGAACCTCTCATTCGTCTTCAGTGCTCTCCGAACCGTGCGGGAAGGTTTCCCATCACACGGCTCACC
AACTTGATCTTCTGCGGGAACCTTATGTCAGAACAGGCCTGGCAAAAGAAGTACGGTCTCGCTTTCCTTTGCCACTCAAGTGTACGGCATCTGCCGTGCT
TAGGCCCCTTCTTCCCTTCCCTAATCCAAAAATGAGTCCACCGCCTGCCTGGCACTGTATGGGTATAGGTATGGCGTGCAGGCCAGCCTCCCTTGGATTT
TAGGTGATTAACTACCGAAGCGAAGAAAAGGCTGGATCAAGAAAAGGGGGGTACTACGAGCCCTCTGCCCCACGCATCTAACCAGCTCGCGTGGTTCACC
GGTTCCACCGACGTCACCCTTAGATAGAGTTATTCAGTCGATACAGAGATGCGCTTAAAGTGGGGGGTGTGCTGTCCCTATTGGGCTGGGCCCTTCCCCA
TAAGGCCCCAC