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Detailed information on CNT3068307


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30371282Leersia perrieriOryza glumipatula5.6624.0988.6853forward
CNT30593965Leersia perrieriEragrostis curvula6.0820.2894.7457reverse complement

Expression of CNT3068307

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MTNLLMFKWTVCCVFFAAMLNCSCIFISFDILLIFYVHVHIYVKCLCS*

>peptide 2 (31 aa)
MVDMLYPSACYFSSILYLLSIFTHSYVSFGF*

>peptide 3 (63 aa)
KKQKGIGGNRSSAAAAALAFPPSPPLLRLALRHRLGDRRRRCRRRARPPPVVAAVSKVWRVPV*

Sequence

>CNT3068307
AAAAAAACAGAAGGGGATCGGGGGAAATAGAAGCAGCGCCGCTGCCGCTGCCCTAGCTTTTCCGCCGTCGCCGCCTCTGCTCCGCCTTGCGCTGCGCCAT
CGGTTGGGGGACCGTCGCCGTCGCTGCCGCCGCCGAGCTCGTCCTCCTCCTGTTGTTGCTGCCGTCTCCAAGGTGTGGAGGGTTCCGGTATGAGAGGTGT
TACGTCGTTTGACCGACAGGGTTAAAGGCAAGTGCATGACGAACTTGCTAATGTTTAAATGGACGGTTTGTTGTGTATTCTTTGCTGCAATGTTGAATTG
TTCATGTATATTTATCTCTTTTGATATTCTATTGATATTCTATGTTCATGTTCATATTTACGTCAAATGTTTATGTTCATGAGATATTGATTTCAGTTTT
TGAAAATTGAAATACCACGCGTAGCCATGGAGTTTATTTGCTTCTATGTCCATGATCCTATGAGTAAGCGCTGGCCCCGCTTTCCTCGGCTTACCGGTAA
CGCTTAAATGATGTCCATGTATGCCCGGGAGGGGAACTACTACTTCTTGATATGAATTTCAAAGGCAATTCAATTTTCCATTTGATTCCTCTTTATGGTT
GATATGTTGTATCCAAGTGCATGTTATTTTAGTTCTATATTGTACTTGCTGAGTATTTTTACTCACTCTTATGTTTCATTTGGTTTTTAGGTACTAAGTG
ATCCAGACATGCATGGGACGGGAGTAGCTCCTTGATCAACACCTTTTGCACACACTTACATAATCTTTCATTAGTTTGATCAGCATAAATTAGACTTGTA
AAGGCCATTTGAAGTGGTATTTATTATTTTGTTGCGGTTTAGGTGGACTTATTGTTGGTTTGGAATTTCTGGGTTGATGGTTATTGTTTATCTATTAAAC
TGCCTGTCGTGGATGTTCATAAATACAGGGGAGGCTC