Detailed information on CNT30683064


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30190327Triticum urartuSecale cereale87.6388.9687.59411forward
CNT30291706Triticum urartuTriticum aestivum67.1673.7798.1315forward
CNT30222985Triticum urartuHordeum vulgare95.9596.1589.78450forward
CNT30661953Triticum urartuTriticum dicoccoides93.675.6993.17439forward
CNT30149122Triticum urartuBrachypodium distachyon20.2618.8187.3795forward

Expression of CNT30683064

Peptides detected in this lncRNA

>peptide 1 (88 aa)
MINDLAAAAGAAAAGAALALGAAAAAASSAARHLRGCLGLDGGLDWCWLGASCVLLACWLEEQWQAARAIYRRVSITEGGGGEDEEGNE

>peptide 2 (51 aa)
MHGSAPALLMLAGAYIHTKTLDQVALHGTRWMDGSIIDMMHARGACMIDDQ*

>peptide 3 (47 aa)
HKHMYRLNHGRFYLGVGLHAWECTCSAHAGRCLHTYKDPRSGSVTWY*

Sequence

>CNT30683064
CACAAACACATGTATAGGTTAAACCACGGGAGATTTTATTTAGGGGTCGGTTTACATGCATGGGAGTGCACCTGCTCTGCTCATGCTGGCAGGTGCTTAC
ATACATACAAAGACCCTCGATCAGGTAGCGTTACATGGTACTAGATGGATGGATGGATCGATCATAGATATGATGCATGCGCGCGGTGCATGCATGATCG
ATGATCAATGATCTAGCAGCTGCAGCAGGAGCAGCCGCAGCTGGTGCCGCACTTGCACTGGGCGCTGCCGCAGCCGCAGCTTCCTCCGCAGCAAGACATC
TTCGAGGTTGCTTGGGATTGGATGGAGGCCTTGATTGGTGTTGGCTAGGAGCTTCCTGTGTGCTTCTTGCTTGCTGGCTTGAGGAACAATGGCAGGCAGC
GAGGGCTATTTATAGGCGAGTGAGCATCACGGAAGGAGGGGGAGGAGAAGATGAAGAAGGAAATGAGAG