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Detailed information on CNT30683050


BLAST search results

BLAST vs Swiss-Prot:
sp|P05698|RBL_HORVU, E-value = 0.0

BLAST vs NONCODE:
NONMEST005601, E-value = 2e-159

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019929Triticum urartuCitrullus lanatus15.3248.1689.47209forward
CNT30629265Triticum urartuVigna unguiculata31.6738.1688.89432forward
CNT30480921Triticum urartuChara braunii16.2829.2182.88222forward
CNT30434475Triticum urartuPapaver somniferum19.5769.5389.89267forward
CNT30121217Triticum urartuCitrus clementina40.1861.0987.41548forward

Expression of CNT30683050

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MDKLHNRSIGCLPQQQARCDSIVLCNDQDW*

Sequence

>CNT30683050
TTTGTTTCTTTTTTATTTATACCTTCTTTATCTTTAGTTTTATCTAGTTAATCAATAGTATCTACCGGCTCGAACTCGAATTTGATCGCCTTCCATACTT
CACAAGCTGCGGCTAGTTCAGGACTCCATTTGCAAGCTGCTCGGATAATTTCATTACCTTCGCGAGCAAGATCGCGCCCTTCGTTACGAGCTTGTACACA
GGTGCATTTCCCCAAGGATGTCCTAAAGTTCCTCCACCAAATTGTAATACAGAATCGTCCCCAAAGATTTCGGTCAGAGCTGGCATATGCCAAACATGAA
TACCACCTGAAGCTACCGGTATAACACCTGGCATGGATACCCAGTCCTGAGTGAAAAAGATACCGCGAGCACGATCTTTTTCAATAAAATCATCGCGCAA
TAAATCAACAAAACCTAAAGTCATTTCGCGTTCCCCTTCTAACTTACCTACTACTGTACCGGAGTGGATATGATCTCCCCCAGACATACGCAATGCTTTA
GCTAATACACGGAAATGCATACCATGATTTTTCTGTCTATCAATAACTGCATGCATTGCACGGTGAATGTGAAGAAGTAGGCCATTGTCGCGGCAATAAT
GAGCCAAAGTAGTATTTGCGGTGAATCCCCCAGTTAAGTAGTCATGCATTACAATAGGAACCCCTAATTCTCTTGCAAATACAGCTCTCTTAATCATTTC
TTCACATGTACCCGCAGTCGCATTCAAGTAATGCCCCTTGATTTCACCGGTTTCGGCCTGTGATTTATAAATAGCTTCGGCACAAAAGACAAAACGGTCT
CTCCAGCGCATAAATGGACGACCGTACTTGTTCAACTTATCTCTTTCAACTTGGATACCATGAGGCGGGCCTTGGAAAGTTTTTGAATAAGTAGGGGGAA
TTCGTAGATCCTCCAAACGTAGAGCACGTAGGGCTTTGAAACCAAATACGTTACCTACAATGGAAGTAAACATGTTAGTAACGGAACCCTCTTCAAATAG
GTCTAATGGATAAGCTACATAACAGATCCATTGGTTGTCTTCCCCAGCAACAGGCTCGATGCGATAGCATCGTCCTTTGTAACGATCAAGACTGGTAAGT
CCATCAGTCCAAACAGTTGTCCATGTACCAGTAGAAGATTCGGCAGCTACTGCAGCCCCTGCTTCTTCGGGAGGAACCCCAGGCTGAGGACTTACTCGGA
ATGCTGCCAAGATATCAGTATCCTTAGTTTCATACTCTGGGGTGTAGTAAGTCAATTTATAATCTTTAACACCAGCTTGAAATCCAACACCTGCTTTAGT
TTCTGTTTGTGGTGACATAAGTCCCTCCCTATAACTCTTGAATTAAGAATTCTCACAATAACAG