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Detailed information on CNT30683015


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30234810Triticum urartuBrassica oleracea56.7573.8493.92559forward
CNT30248542Triticum urartuAvena sativa79.2957.8998.21781reverse complement
CNT30229838Triticum urartuAnanas comosus44.9710098.19443forward
CNT30218527Triticum urartuKalanchoe fedtschenkoi75.5349.9798.52744forward
CNT3037914Triticum urartuCucumis melo42.0319.4589.61414reverse complement

Expression of CNT30683015

Peptides detected in this lncRNA

>peptide 1 (64 aa)
HRLCRPPSIPLSFSLATVLPRRSVSRISWAPDPRRPRANTHRLRHGLLGYLILFAPHAFAPQRW*

>peptide 2 (87 aa)
MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSELVSRAFRHFLATFTFNPIHRLRALYAQSFRRTLAPPVLPRLLARS*

>peptide 3 (50 aa)
MIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG*

Sequence

>CNT30683015
CACCGCTTGTGCAGGCCCCCGTCAATTCCTTTGAGTTTCAGTCTTGCGACCGTACTCCCCAGGCGGAGTGTTTCACGCATTAGCTGGGCCCCTGATCCGC
GTAGACCAAGGGCGAACACTCATCGTTTACGGCATGGACTACTAGGGTATCTAATCTTGTTCGCTCCCCATGCTTTCGCACCCCAGCGTTGGTAGGGACC
CAGAGAGCTGCCTTCGCTTTTGGCGTTCCTTCGTAGATCTACGGATTTCACCCCTACACACGAAATTCCACTCTCCTCTGTCTCACTCAAGTGAATTGGT
TTCGAGAGCATTCCGCCACTTTTTGGCGACTTTCACTTTCAACCCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCC
CCCGTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTCGAGTCCTGTCATGATCGCGCACTCGACGAAAGAGCTTTACAAGCGGCATTG
CCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCC
CAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGTCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTACGCAGGCTCATCAAACATCG
CTTTTGAGCTTTCTTCAGGATTTGGCCCGAACTGTTCGGCAGATTCCCACGCGTTACGCACCCGTTCGCCACTTTGTTCTCAACTATTCTGATTCCAGCA
AACGGAGGCCGTTAGGTCAAAGCCGTAGCGTGCGCCCTGTAGTTTTGAAGCAGGGCGAGACAACTTTAGCTAGGAGCCTCTTTTCCTTCTGCCCAGCTCC
CCAAAAACAACGACCGACTTGCATGTGTTAAGCATATAGCTAGCGTTCCTTCTGAGCCAGGATCAAACTCAGATTTTGACTATGA