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Detailed information on CNT30682633


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30479293Triticum urartuArabidopsis halleri17.1133.4785.7184forward

Expression of CNT30682633

Peptides detected in this lncRNA

>peptide 1 (43 aa)
SIDTSYITTSDMLLHLKQNRNTCFDAVHCHLHVDVTKQKLAEF*

>peptide 2 (51 aa)
MRYAAMISDTSWAIRGTLFRLISTILSSFLLNSGFSTSGTAGKILAVVRFVC

>peptide 3 (37 aa)
MDPSSTNSVDKLGLKLGKINGARLDWGHEVRSDDLRH*

>peptide 4 (37 aa)
MIMSEKKGIDGSFFYKFSRQAWAQTRQNQRSQTRLGA*

Sequence

>CNT30682633
CAAGTATCGACACAAGTTACATAACAACTTCAGATATGCTTCTCCACCTGAAGCAAAACCGGAACACATGCTTTGATGCAGTTCACTGCCACTTACATGT
TGATGTGACTAAGCAAAAACTTGCCGAGTTTTAATACTTTACAGATGAGCACAGGAGGATGTAGATCCTGTTAATTAACCATGGATCATGTGCTCATTCA
GAGACTCTCGAGGAGCATGATGCATGATTATGTCTGAAAAGAAAGGCATAGATGGATCCTTCTTCTACAAATTCAGTAGACAAGCTTGGGCTCAAACTCG
GCAAAATCAACGGAGCCAGACTCGATTGGGGGCATGAGGTACGCAGCGATGATCTCAGACACTAGTTGGGCAATAAGAGGAACCCTCTTCAGGTTGATAT
CTACCATCCTGTCTAGCTTCCTCTTGAATTCAGGGTTCTCAACATCCGGCACAGCAGGGAAGATCCTCGCCGTCGTGCGGTTTGTCTGCAG